| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1371 |
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| Symbol | rbsA |
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| ID | 6989069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1492098 |
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| End bp | 1493612 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379727 |
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| Product | D-ribose transporter ATP binding protein |
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| Protein accession | YP_002262826 |
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| Protein GI | 209694898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAC CCATTCTCGA ACTAAAAGGG ATTGAAAAAG CCTTCCCCGG TGTGAAAGCA
TTGGATGGCG CTTGCCTTAA TGTTTATCCC GGTAAAGTAA TGGCATTAAT GGGCGAAAAT
GGCGCCGGTA AATCGACCTT AATGAAGTCT CTCACTGGCA TTTATGCAAT GGACGCGGGT
GAAATACGTT ACGAAGGTAA AGCGGTTAAC TTTAATGGTC CTAAGCATTC TCAAGAATCT
GGTATCAGTA TTATTCACCA AGAGTTGAAT CTTATTCCTG AATTAACGAT TGCTGAGAAT
ATCTTCTTAG GCCGTGAGAA AACCAATGTC TTTGGTGGCA TCAAATGGGC TGAGATGTAC
AGCGATGCTG ACGCCCTACT TAACCGTTTA AATGTAAAAC ACCACTCTCG TCAACTGTTA
GGTGAATTGA GTTTAGGTGA GCAACAAATG GTTGAAATTG CAAAGGCACT GTCGTTCAAA
TCGAAAGTTA TCATCATGGA TGAGCCAACG GATGCGTTAA CCGATACTGA AACCGAATCT
CTGTTTAAAG TGATTAATGA ATTACGTGAT GAAGGCTGTG GCATTGTTTA TATCTCTCAC
CGTCTAAAAG AGATCTTTGA GATCTGTGAT GACATTACCG TGCTTCGCGA TGGTAAATTC
ATCGGTGAAC GTGTGGTTGC CGAGATTGAT GAAGATACCT TAATTGAAAT GATGGTAGGC
CGTCGATTAG ATGAGCAATA CCCTCGTATT GATGCAACAC ACGGTGATAA ATCATTAGAA
TTATTCGATG TGTCTGGTCC TGGTGTTGAG AATGTTAGTT TCTCATTAGA TCGCGGTGAA
ATCCTTGGTA TCTCTGGCTT GATGGGTGCA GGTCGTACTG AGTTAATGAA AATCATCTAC
GGTGCTGCAC CAATGACGTG TGGCGCAATC AAACTTAATA ACAAAATGAT TAACCCTATC
TCTCCTCGTG ATGGGCTGGC AAATGGCATT GCTTATATCT CTGAGGATCG CAAAGGCGAT
GGCTTAGTAT TAGGTCTATC TGTCAAAGAA AACATGTCGT TATGTTCTTT GGATCAATTA
TCAAAAGGCA TTCAACTTGA TCATCAAGCA GAAGTGACGG CGGTTGAAGA TTTCATCCGC
TTATTTAATA TCAAAACCCC TTCTCGTGAC CAAATCATTG GTAACTTATC TGGTGGTAAT
CAACAAAAAG TAGCGATTGC CAAAGGTCTT ATGACTCGCC CTAAAGTCCT TATTTTAGAT
GAGCCAACAC GTGGTGTTGA TGTCGGTGCG AAAAAAGAGA TCTACCAATT AATTAATCAA
TTTAAAGCCG AAGGCATGAG CATTATTTTA GCCTCTTCTG AAATGCCAGA AGTGTTAGGA
ATGAGTGACC GCATTTTAGT GATGCATGAA GGCCATATTA GTGGTGAATT CATGGCTAAA
GATGCCGATC AAGAAAAATT ATTGGCTTGT GCAGTAGGTA AAACTGTTCA GCAAAACGTC
GAGGTAACAG CATGA
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| Protein sequence | MNQPILELKG IEKAFPGVKA LDGACLNVYP GKVMALMGEN GAGKSTLMKS LTGIYAMDAG
EIRYEGKAVN FNGPKHSQES GISIIHQELN LIPELTIAEN IFLGREKTNV FGGIKWAEMY
SDADALLNRL NVKHHSRQLL GELSLGEQQM VEIAKALSFK SKVIIMDEPT DALTDTETES
LFKVINELRD EGCGIVYISH RLKEIFEICD DITVLRDGKF IGERVVAEID EDTLIEMMVG
RRLDEQYPRI DATHGDKSLE LFDVSGPGVE NVSFSLDRGE ILGISGLMGA GRTELMKIIY
GAAPMTCGAI KLNNKMINPI SPRDGLANGI AYISEDRKGD GLVLGLSVKE NMSLCSLDQL
SKGIQLDHQA EVTAVEDFIR LFNIKTPSRD QIIGNLSGGN QQKVAIAKGL MTRPKVLILD
EPTRGVDVGA KKEIYQLINQ FKAEGMSIIL ASSEMPEVLG MSDRILVMHE GHISGEFMAK
DADQEKLLAC AVGKTVQQNV EVTA
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