| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1352 |
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| Symbol | |
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| ID | 6987023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1468292 |
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| End bp | 1469371 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379710 |
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| Product | organic solvent efflux pump precursor (periplasmic linker protein component) |
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| Protein accession | YP_002262809 |
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| Protein GI | 209694881 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.896212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAT TAATGAGATT TTCTTTATTG TCGACAGCCT TATTACTTAC GGCTTGTAAA
CCAGCGCCGA TTGATACGGT GTTAGAAGCA CCTGATGTCA TTATTAAAAC GATTAATTCC
GGTTTAGTGA GTGATCATCT TTATCTTCCT GCGGTCGCTA CAGCGGCTGA TCGCTCTCAT
CTAAGTTTTC GTTTATCTGG TGAGATTAAA GAGTTAAATG TTCGCTCGGG AGAAACCGTT
AAAGCAGGTC AAGTCTTAGC GATTTTAGAT AAGACGGATT ACAACATTGA TGTAGATAAT
GCGAGAGCAA GATACAACGT GGCAAACAGC CAGTATCGAC GTTCGAAACC GTTAGTCGAT
AAAGGATTAC TTGCTAAATC GCAATTTGAT GAATTAGCCG CCCAACGTCA GATTGCATTG
GCTGATTTAG AATTGGCAAA ATTGCGTTTA AGTTTTACTG AATTAAAAGC CCCAATTGAT
GGGATCATTT CCCGAGTGAG TGTCGAGCAA TTTGAAAACA TTCAAGTTGG GCAGCAAATC
TTTAATATTC ATAATCGTAG CGCGGTTGAT ATTACGGTTC AGGTGCCTGA TAAGTTATAT
GCTAAACAAC CAAATAAAGG ATTAGTCGAT AAAATCAAAG CTTCTGTTCG TTTAGATGAT
GGTTCATCGT ACCAAGCGAC AGTTAAAGAA TTCACCACAG AGCCAGATCC TGAATCGGGT
GCGTACTTAG TGACGTTGAC GATGCCAATG CCAAAAGATC AATTTATTTT GGATGGTATG
GCGGTTGAAG TAACTACTGA GCAAAGTTCG CTAGGCGCAT CGAGTCAATT TGGTATGGTT
ATTCCGATCG AAGCCGTTTT TAATGAAGAT GGAGACAACA TTGATCGAGA TGAAAAATAC
GTTTGGCTTG TTGACTCTGA CAATAAAGTG AAAAAGCAAA AAATAATCAC AACCAAGGCC
ACATCTTCGG GCTTACGAGT CGTAGAAGGT GTCACAACGG GAGATCGTAT TGTTATTGCG
GGTGTTTCTC GCTTACGTGA TGGCATAGAA GTGAATATCA TCAATACGGA GGAGAAATAA
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| Protein sequence | MQKLMRFSLL STALLLTACK PAPIDTVLEA PDVIIKTINS GLVSDHLYLP AVATAADRSH
LSFRLSGEIK ELNVRSGETV KAGQVLAILD KTDYNIDVDN ARARYNVANS QYRRSKPLVD
KGLLAKSQFD ELAAQRQIAL ADLELAKLRL SFTELKAPID GIISRVSVEQ FENIQVGQQI
FNIHNRSAVD ITVQVPDKLY AKQPNKGLVD KIKASVRLDD GSSYQATVKE FTTEPDPESG
AYLVTLTMPM PKDQFILDGM AVEVTTEQSS LGASSQFGMV IPIEAVFNED GDNIDRDEKY
VWLVDSDNKV KKQKIITTKA TSSGLRVVEG VTTGDRIVIA GVSRLRDGIE VNIINTEEK
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