Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1288 |
Symbol | |
ID | 6986968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1397881 |
End bp | 1398354 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643379652 |
Product | hypothetical protein |
Protein accession | YP_002262751 |
Protein GI | 209694823 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000264072 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG TTGCGATCCT CGTTGATGTG CAAAACATCT ACTACACTAC GCGTGACGTA TACCAACGTC ATTTTGACTA CAATGCATTA TGGGCGAAAG TGACTGATGG CCGTAAGGTT GTCGGTGCAA ACGCGTATGC CATTGCTCGT AGTGATGATA AGCAAAAGCA GTTTCATAAT ATTCTTCGTG GCATTGGGTT TGATGTAAAG TTAAAACCGT TTATTCAACG CCGTGACGGT TCAGCGAAAG GCGATTGGGA TGTAGGCATT GCGTTAGATG CCATCGAGCT TGCTGAGCAG GCGGATATCG TGGTTATTCT GTCGGGCGAT GGTGATTTTG AATTACTCGT TCAGCGAATT CAGTCACGTT TTAACAAAGA AGTTGAAGTG TATGGCGTTG CAGATTTAAC CGCAAATGCA TTAATTGATG CCGCTGACCG CTTTATTCCA ATCGAAGGTA ATCTATTGTT ATAA
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Protein sequence | MKTVAILVDV QNIYYTTRDV YQRHFDYNAL WAKVTDGRKV VGANAYAIAR SDDKQKQFHN ILRGIGFDVK LKPFIQRRDG SAKGDWDVGI ALDAIELAEQ ADIVVILSGD GDFELLVQRI QSRFNKEVEV YGVADLTANA LIDAADRFIP IEGNLLL
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