Gene VSAL_I1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1288 
Symbol 
ID6986968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1397881 
End bp1398354 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content43% 
IMG OID643379652 
Producthypothetical protein 
Protein accessionYP_002262751 
Protein GI209694823 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000264072 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG TTGCGATCCT CGTTGATGTG CAAAACATCT ACTACACTAC GCGTGACGTA 
TACCAACGTC ATTTTGACTA CAATGCATTA TGGGCGAAAG TGACTGATGG CCGTAAGGTT
GTCGGTGCAA ACGCGTATGC CATTGCTCGT AGTGATGATA AGCAAAAGCA GTTTCATAAT
ATTCTTCGTG GCATTGGGTT TGATGTAAAG TTAAAACCGT TTATTCAACG CCGTGACGGT
TCAGCGAAAG GCGATTGGGA TGTAGGCATT GCGTTAGATG CCATCGAGCT TGCTGAGCAG
GCGGATATCG TGGTTATTCT GTCGGGCGAT GGTGATTTTG AATTACTCGT TCAGCGAATT
CAGTCACGTT TTAACAAAGA AGTTGAAGTG TATGGCGTTG CAGATTTAAC CGCAAATGCA
TTAATTGATG CCGCTGACCG CTTTATTCCA ATCGAAGGTA ATCTATTGTT ATAA
 
Protein sequence
MKTVAILVDV QNIYYTTRDV YQRHFDYNAL WAKVTDGRKV VGANAYAIAR SDDKQKQFHN 
ILRGIGFDVK LKPFIQRRDG SAKGDWDVGI ALDAIELAEQ ADIVVILSGD GDFELLVQRI
QSRFNKEVEV YGVADLTANA LIDAADRFIP IEGNLLL