Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1263 |
Symbol | |
ID | 6986945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1371953 |
End bp | 1372681 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643379632 |
Product | membrane protein |
Protein accession | YP_002262731 |
Protein GI | 209694803 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTTC CTCTAATGGA TTTAGGTTTG TTGTTTGCGA TGATTCTGAT TTTTATCGGG TCATTTGTAC AAAGTGCGAT TGGTTTTGGT TTAGCGATTG TCACGGCACC TCTTTTATTT CTTATTTCGC CGAGTTACGT TCCTGCGCCT ATTGTGATTG TTGGTTTGTT TTTATCCATT ATTAATGCGT ATAAATACAA AGAAAATGTC TCTTTTCGTG GCTTAGGGTA TGCATTTTTA GGGCGAATTC CTGGATCGAT TCTTGGAGGT TTGCTGCTTT ATTATGTTGA TGCAAAACTC TTGTCACTTT GGATCGGGGT TGTCGTATTG CTTGCGGTTG TGGTGAGTTT ATTGCCTTTT CGCATTGAGC CAAATAATTC AAGAATGACA ATAGCTGGTT TTTTCTCTGG TTTGTTCGGT ACGAGTTCTG GTATTGGTGG TCCGCCAATG GCGTTGTTAT TACAGCACCA AGAGGCGAAT TTAATCCGCG CTAATTTATC TGCTTTCTTT GTTGTGAGTA GCCTTATATC GCTAGCGGTG CAAGTCCCTG CTGGTTATAT GAGCATGTCG CATTTGTATC TTACTTTACC GTTATTGCCA GCGTCATATG TTGGTTATTT AGTCGCAATG AAAGTGGTGG ATAGAATAGA CAAAGAGACG ATTAGAAACG TGTCTTTAGT GATGTGTTCG ATCTCTGGTG TCGCAGCGAT TGTGTTAGCG TTAAGATAA
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Protein sequence | MELPLMDLGL LFAMILIFIG SFVQSAIGFG LAIVTAPLLF LISPSYVPAP IVIVGLFLSI INAYKYKENV SFRGLGYAFL GRIPGSILGG LLLYYVDAKL LSLWIGVVVL LAVVVSLLPF RIEPNNSRMT IAGFFSGLFG TSSGIGGPPM ALLLQHQEAN LIRANLSAFF VVSSLISLAV QVPAGYMSMS HLYLTLPLLP ASYVGYLVAM KVVDRIDKET IRNVSLVMCS ISGVAAIVLA LR
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