| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1260 |
|---|
| Symbol | murQ |
|---|
| ID | 6986942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1369405 |
|---|
| End bp | 1370307 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643379630 |
|---|
| Product | N-acetylmuramic acid-6-phosphate etherase |
|---|
| Protein accession | YP_002262729 |
|---|
| Protein GI | 209694801 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2103] Predicted sugar phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00274] N-acetylmuramic acid 6-phosphate etherase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG ATCTAACCAC ATTGGTAACA GAAAGCCGTA ATCAAGCAAG TGAGCAAATA
GATGTGTTAT CAACCGTAGA AATGTTGACG GTTATTAATA AAGAAGACCA GAAAGTGGCG
TTAGCCGTTG AAGCTATTTT GCCTCAAATC GCTGAAGTTG TAGATGCAAT TGCTGTGGCG
TTTCAATGTG GTGGGCGTTT GATTTATATC GGTGCAGGCA CATCTGGCCG CTTAGGTATT
TTGGATGCAA GTGAATGCCC TCCAACCTAC GGCTCTAATC CTGACCTGGT TGTGGGTTTA
ATTGCTGGCG GTCATAAAGC GATTTTAAAA GCAGTAGAAA ATGCAGAAGA CAACCGTGAA
TTAGGCGCAT CAGATCTGCA AGATTTGGGA TTGAACGAGA AAGACGTGCT AGTGGGTATT
GCCGCGAGTG GACGTACTCC TTATGTTCTT GGTGCGATGG CATACGCAAA ATCAGTCGGT
GCAACCGTAG CAACGCTGAG TTGTAACCCA AATAGCCCAA TGACAGAACT GGCAGACATC
AATATGACAC CAGTTGTTGG CCCTGAAATC GTAACTGGCT CTTCTCGTAT GAAAGCCGGA
ACGGCTCAAA AATTGGTTCT GAACATGTTA ACAACCGGAG CGATGATCCG CACTGGTAAA
GTATTTGGTA ACTTGATGGT TGATGTCGAA GCAACCAATG CAAAATTAGT ACAGAGACAA
AAGAATATTG TTATTGAGGC TACGGGCTGT TCAGAAACGG AAGCCGCAGA GTCGTTATCT
CAATGTAATA ACCACTGTAA GACAGCGATT CTTATTGTGT TGTCTGGGCT CGATGCGAAA
AGTGCGACAG ACAAATTGAC GGAATATAAT GGATTTATTC GCGATGCACT CGCTAATAGC
TAA
|
|---|
| Protein sequence | MKIDLTTLVT ESRNQASEQI DVLSTVEMLT VINKEDQKVA LAVEAILPQI AEVVDAIAVA
FQCGGRLIYI GAGTSGRLGI LDASECPPTY GSNPDLVVGL IAGGHKAILK AVENAEDNRE
LGASDLQDLG LNEKDVLVGI AASGRTPYVL GAMAYAKSVG ATVATLSCNP NSPMTELADI
NMTPVVGPEI VTGSSRMKAG TAQKLVLNML TTGAMIRTGK VFGNLMVDVE ATNAKLVQRQ
KNIVIEATGC SETEAAESLS QCNNHCKTAI LIVLSGLDAK SATDKLTEYN GFIRDALANS
|
|---|
| |