Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1243 |
Symbol | |
ID | 6986928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1352593 |
End bp | 1353501 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643379614 |
Product | putative exported amidase |
Protein accession | YP_002262713 |
Protein GI | 209694785 |
COG category | [R] General function prediction only |
COG ID | [COG2992] Uncharacterized FlgJ-related protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTTTAT CTAAAAAGTT AAAACATATT TCGGCCTCTT TGTTATTAAT TGCGTCATCA AGTGCGATCG CTAATACGTC GCTTCCCCTC TCTCCAGAGA AAATAACCCA GCCTTATCCT GAGGTGGAAG TAGAAACAAT TCACTCAGCA CAATCTCTTA TTAGTGAGTT TAAAGAGCAT CAGTACCAAT TAAGCAACAT TACAAAAAAT AGTACGGTCC CTGTTTTCTT TGTTGAAAAT CTTCCTGATG ATTTAAATTC ATTACCAGTA GAAGAGAAAA TATCAGGATT TATTCGTTTA TTACTACCAA CAATTATTGA TGTAAATAAG CACATCATTA CCGTTAGAAA TGAAGCGATT TCATTATCCA AACAACCAAA AACAGAATGG ACAAAAGAAG AAAGTCTGTG GATGAGTAAT TTAATGGCGT CTTATGATGT TAACACCAAC AACATCGATG AGTTACTTCT TCATCTTGAT GTTATCCCTG TAGGCATGGT GCTTGCTCAA GGTATCGATG AAAGTGGTTG GGGTACAAGT TACTTCGCTA TCAATGGTAA TAGCTTATTT GGTGAACATC TGTCATCTCA AGGTGGTAAG TATTTAAGTA CCCCTGGTGG GCATGTAAAA GTAGCCGCAT TTGATAACCT TTTTGAAGGT ACTGCGCGCT ATATGTACAA CTTAAACACA ACATCGGCTT ACCATGATCT TTGGACGTTA CGTCAACAAT TACGCAAAGA TAATAAGTTA TCAGGCTATG AGTTGGTTGA ATCACTGTCT CATTATTCAA CCCGTGGACA AGCGTACGTT GATAATTTAC AAGCACTAAT CAAACATCAT CATTTAGACA GTTTTGATAA TGTTGAGTTT AATTACACGA CACCACTGCG TATTCGATTT ACAAAATAA
|
Protein sequence | MSLSKKLKHI SASLLLIASS SAIANTSLPL SPEKITQPYP EVEVETIHSA QSLISEFKEH QYQLSNITKN STVPVFFVEN LPDDLNSLPV EEKISGFIRL LLPTIIDVNK HIITVRNEAI SLSKQPKTEW TKEESLWMSN LMASYDVNTN NIDELLLHLD VIPVGMVLAQ GIDESGWGTS YFAINGNSLF GEHLSSQGGK YLSTPGGHVK VAAFDNLFEG TARYMYNLNT TSAYHDLWTL RQQLRKDNKL SGYELVESLS HYSTRGQAYV DNLQALIKHH HLDSFDNVEF NYTTPLRIRF TK
|
| |