Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1217 |
Symbol | |
ID | 6986905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1324786 |
End bp | 1325310 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643379591 |
Product | hypothetical protein |
Protein accession | YP_002262690 |
Protein GI | 209694762 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.304346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATGC TTTCTGATAT AACTCTTACT CCTTTTTCTA ATTCATTAAA TGTTGCCATT CATTTAATGA CTAAAGCAAA AGCACATTTT GAGGCACAAA ATCGAAATAC AAATGACATC GTTGATCTTC AATTAGTTGA TGATATGCTT CCTCTTTCAT TCCAAGTAAA TTCAATTTGT AAGCATACTC TTGGGGCAAC AAAAGCCGTA TTAAGCGGTA ACTTTTATAT TCCATCACCT TTAGGTGAAA TTGATTTTAA TGGCTTAATT GAATTACTTC AAAATACACA AAAAGAGTTG AGTGCAATTA CAGAAAATGA GGTAAATTCA CGCTCAGGTG AAACCGTTAT TTTCCACTAT CCAGAACGAC CAATGCCGTT TACTGCTGAG AATTTCATTA CCTCATTCTC AACACCAAAT CTATACTTTC ACCAGACCAC GCTGTACAAC TTACTTCGAA AAGAAGGCGT ACCATTGAGT AAATTAGATT TCATTGGTGC TTTATCTCTT AGCCCTTCAG AATAA
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Protein sequence | MTMLSDITLT PFSNSLNVAI HLMTKAKAHF EAQNRNTNDI VDLQLVDDML PLSFQVNSIC KHTLGATKAV LSGNFYIPSP LGEIDFNGLI ELLQNTQKEL SAITENEVNS RSGETVIFHY PERPMPFTAE NFITSFSTPN LYFHQTTLYN LLRKEGVPLS KLDFIGALSL SPSE
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