Gene VSAL_I1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1217 
Symbol 
ID6986905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1324786 
End bp1325310 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content34% 
IMG OID643379591 
Producthypothetical protein 
Protein accessionYP_002262690 
Protein GI209694762 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.304346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATGC TTTCTGATAT AACTCTTACT CCTTTTTCTA ATTCATTAAA TGTTGCCATT 
CATTTAATGA CTAAAGCAAA AGCACATTTT GAGGCACAAA ATCGAAATAC AAATGACATC
GTTGATCTTC AATTAGTTGA TGATATGCTT CCTCTTTCAT TCCAAGTAAA TTCAATTTGT
AAGCATACTC TTGGGGCAAC AAAAGCCGTA TTAAGCGGTA ACTTTTATAT TCCATCACCT
TTAGGTGAAA TTGATTTTAA TGGCTTAATT GAATTACTTC AAAATACACA AAAAGAGTTG
AGTGCAATTA CAGAAAATGA GGTAAATTCA CGCTCAGGTG AAACCGTTAT TTTCCACTAT
CCAGAACGAC CAATGCCGTT TACTGCTGAG AATTTCATTA CCTCATTCTC AACACCAAAT
CTATACTTTC ACCAGACCAC GCTGTACAAC TTACTTCGAA AAGAAGGCGT ACCATTGAGT
AAATTAGATT TCATTGGTGC TTTATCTCTT AGCCCTTCAG AATAA
 
Protein sequence
MTMLSDITLT PFSNSLNVAI HLMTKAKAHF EAQNRNTNDI VDLQLVDDML PLSFQVNSIC 
KHTLGATKAV LSGNFYIPSP LGEIDFNGLI ELLQNTQKEL SAITENEVNS RSGETVIFHY
PERPMPFTAE NFITSFSTPN LYFHQTTLYN LLRKEGVPLS KLDFIGALSL SPSE