Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1201 |
Symbol | |
ID | 6986890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1310164 |
End bp | 1311135 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643379576 |
Product | putative IMP dehydrogenase/GMP reductase |
Protein accession | YP_002262675 |
Protein GI | 209694747 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0435] Predicted glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGACTTT TAGTTGACGG AAAATGGCAC ACGGATTGGT ACGACACGGC ATCAACGGGC GGTAAATTTG AGCGTAAAGC GTCCAGTTTT CGCCATTGGA TAACAAAAGA CGGCAGGGCT GGCCCATCTG GAGTGTCAGG TTTTAATGCT GAATCTGGGC GTTATCATTT ATATGTTTCG CTGGCTTGTC CTTGGGCACA CCGCACAGTG ATTTACCGTA AGCTAAAAGG GCTTGAAGAC ATGATTTCGA TGTCTGTGGT GAATGCGTTT ATGGGAGACG ACGGTTGGAC ATTTGAACCG GGTGAAGGCG TTATTGAAGA TACGGTAAAT CATGCAACTT ATGCGCATGA AATTTACACG AAGGCTGCTC CTGACTATAC GGGAAGAGTC ACGGTTCCTA TTTTATGGGA TAAGAAAACC AATACGATCG TGAGTAATGA ATCGGCAGAG ATCATTCGTA TGTTTAATTC TGCTTTTGAT GATATTGGTG CCACTGAATT GGATTTTTCT CCTGAGCACT TATTAAATGA CATCGATGAG TTGAATGCAT TTATATACCC AACGATTAAT AATGGGGTGT ATCGAGCGGG TTTTGCTACG ACTCAGGCAG CGTATGATGA TGCGGTTGCC GAAGTATTTG GAGCATTAGA GACGGTAGAA CAACGCTTAT CGACTCAACG TTACTTAATT GGTGATGAGA TCACAGAGGC GGATTGGCGT TTGTTTACGA CATTGATTCG CTTTGATGCC GTTTATGTTG GGCATTTTAA ATGTAACCTA AAACGCATTG TTGACTACCC GAATATTTGG GGCTATTTAC GTGATTTATT TCAACAACCC GGAGTGAGTG AAACGGTTAA TATTGACTAC ATAAAAGCGC ATTATTACGG CAGTCATGAA ACGATTAACC CAACACTTAT TATACCTAAA GGGCCAGCGT TGGATTTCTT TAGCCAACAC CACCGTGACT AG
|
Protein sequence | MGLLVDGKWH TDWYDTASTG GKFERKASSF RHWITKDGRA GPSGVSGFNA ESGRYHLYVS LACPWAHRTV IYRKLKGLED MISMSVVNAF MGDDGWTFEP GEGVIEDTVN HATYAHEIYT KAAPDYTGRV TVPILWDKKT NTIVSNESAE IIRMFNSAFD DIGATELDFS PEHLLNDIDE LNAFIYPTIN NGVYRAGFAT TQAAYDDAVA EVFGALETVE QRLSTQRYLI GDEITEADWR LFTTLIRFDA VYVGHFKCNL KRIVDYPNIW GYLRDLFQQP GVSETVNIDY IKAHYYGSHE TINPTLIIPK GPALDFFSQH HRD
|
| |