| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1187 |
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| Symbol | |
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| ID | 6986878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1294730 |
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| End bp | 1295566 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379562 |
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| Product | transcriptional regulator, AraC-family |
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| Protein accession | YP_002262661 |
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| Protein GI | 209694733 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATG ATGAGAAAGT AAAAAAGGAA ATAGCACACT ACCAAGTAGC AGAAGAGCTT
GGTGGGCTTG AAATATTAAA TGCTGATTAT GAAAAGCAGA CTTTCTCACG TCACAGTCAT
GAAGGATATA CGATTGGTGT CATTGAACGT GGTGCTCAAC ATTTCTATCG CACTGGTGGT
AATCATACCG CACCGCAAGA CAGTATTATC TTAATTAATG CGGATGATAT ACATAGCGGT
CATTCTGCTA CTGATGGAGG GTGGGGCTAT AAGGCGATGT ATCCTTTGCC AGAACAATTA
GAAAGTTTAA GCAGAGAGTT GAGCTACGGG CAAGTTGGCG CGCCATATTT TCCAGAGCCT
GTGGTTTATG ATTCAGAACT AGCGAACCAG TTGAGGCTGG TGTTCACCAT GTTGGATCAA
TCGGATAACC GTTTATTAAG AGAAACCTTA GTCTATGGTG TTTTGGTTAA ACTCATGTGT
AAGCACAGTA AAGCGCGTTA TACCGATGTA ACGATTTCAA AAGCTCAAAA GCCATTGTAT
TTAATTAAAG AATTTTTAGA CGACTTCCCT CAAGCGGATA TCTCTCTTGA AGATTTATCA
CAGCTTAGTA ATCTGAGTGC TTATCATCTA GTTAGATCGT TTCAAAAGAC ATTTGGTCTT
CCTCCACACA GCTATCAAAT TCAGTCTCGT TTACGAATGG CACGTAAACT TCTTAAGCAA
GGGCATTCCT TGTCTGATAC TGCACAAGAA ACGGGATTTT ATGATCAAAG CCATTTACAC
CGTCATTTTA AAAAAGCGAT GGGGATAACC CCAGGGCAAT ACCTCAAACT GTTTTAG
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| Protein sequence | MMNDEKVKKE IAHYQVAEEL GGLEILNADY EKQTFSRHSH EGYTIGVIER GAQHFYRTGG
NHTAPQDSII LINADDIHSG HSATDGGWGY KAMYPLPEQL ESLSRELSYG QVGAPYFPEP
VVYDSELANQ LRLVFTMLDQ SDNRLLRETL VYGVLVKLMC KHSKARYTDV TISKAQKPLY
LIKEFLDDFP QADISLEDLS QLSNLSAYHL VRSFQKTFGL PPHSYQIQSR LRMARKLLKQ
GHSLSDTAQE TGFYDQSHLH RHFKKAMGIT PGQYLKLF
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