| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1160 |
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| Symbol | |
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| ID | 6989109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1263713 |
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| End bp | 1264453 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379538 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002262637 |
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| Protein GI | 209694709 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0211991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTATC ACGTTTCAGC TAATGCACTA AAAAATAAAA CAATTCTCGT TACTGGTGCA
GGAGATGGTA TTGGTAAACA AGCTGCATTA AGTTACGCAA AACACGGCGC TACGGTTATT
TTATTAGGCA GAACTGTCGC TAAATTAGAA GCCGTTTATG ATGAAATTGA AACCGCTGGC
TACCCTACCC CCGCCATTAT TCCTCTGGAT CTAAAAGGCG CAAAAAAACA GCATTATATT
GATATGGCAG AGACCATTCA AAGTCAATTT GGCAAACTTG ATGGACTGCT TCATAACGCT
GGTCTATTAG GTATTCTTAG TCCTTTCGAA CAATTTGAAG AATCTATTTT TGATGAAGTA
ATGCAGATTA ATGTAAAAGC GCAATTCTTA ATGACTCAAG CTTTACTGCC TGTCTTACAA
AAATCAGACG ACTCTCGCAT TATCTTCACG ACGTCAACGG TCGGACATCA AGGCCGTGCT
TTTTGGGGAG CTTACGCTAT CTCTAAATTT GCGACTGAAG GAATGATGCA GACACTAGCG
CATGAAATGG AAGGCACTCA CGTAAAAGTG AACGCTATAA ATCCAGGTGG TACGCACACC
CGTATGCGTG CTCAAGCTTT TCCTGCTGAA GACATTAGCT TACTTAAAAC ACCAGAGGAC
TTAATGCCTT TGTACGTTTA CTTAATGGCT CCTGAAAGTA TTACGGTTAA TGGTCAGTGC
ATTGATGCAC AACCAAAATA A
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| Protein sequence | MNYHVSANAL KNKTILVTGA GDGIGKQAAL SYAKHGATVI LLGRTVAKLE AVYDEIETAG
YPTPAIIPLD LKGAKKQHYI DMAETIQSQF GKLDGLLHNA GLLGILSPFE QFEESIFDEV
MQINVKAQFL MTQALLPVLQ KSDDSRIIFT TSTVGHQGRA FWGAYAISKF ATEGMMQTLA
HEMEGTHVKV NAINPGGTHT RMRAQAFPAE DISLLKTPED LMPLYVYLMA PESITVNGQC
IDAQPK
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