Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1140 |
Symbol | hisI |
ID | 6988664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1243108 |
End bp | 1243728 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643379519 |
Product | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein |
Protein accession | YP_002262618 |
Protein GI | 209694690 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase [COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.275701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAC AAGATTTTGC AACACGTATT GATTGGGAAA AAGTGGACGG CTTAGTACCT GCAATTATTC AAGACTTTAG TTCAAGCCAA GTATTGATGA TGGGCTACAT GAACAAAGAC GCGTTATCAA AAACGTTAGA GACAAAGAAA GTTACTTTTT TCTCTCGCAC TAAGAATCGT TTATGGACTA AAGGTGAAGA ATCAGGCGAT AGCTTAAATT TGGTTAATAT CTCTTTAGAT TGTGATAACG ATACATTACT TATCAAAGTT AAACCTGTTG GTCCAACGTG CCACACAGGG ACAACTACTT GTTGGGATAG CGATAAAACA GAAGAAAGCC AATTAGTTTG GCTTCATCAG TTGGAACAGC TACTTGCCGA GCGTAAGAAT GCTGATCCTG ACTCCTCTTA CACAGCAAGT CTCTACGCCC GTGGCACCAA ACGTATTTCG CAGAAAGTTG GCGAAGAGGG CGTTGAAGTT GCGCTTGCAG CGACGTCGGG TGACAAGGCG GAGCTAGTGT GTGAATCAGC AGATTTGATG TATCACTTGT TTGTTCTGCT TCAAGACCAA GGCTTGTCGT TTGATGATGT GATTAATAAA TTGAAAGAAC GTCATACGTA A
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Protein sequence | MSQQDFATRI DWEKVDGLVP AIIQDFSSSQ VLMMGYMNKD ALSKTLETKK VTFFSRTKNR LWTKGEESGD SLNLVNISLD CDNDTLLIKV KPVGPTCHTG TTTCWDSDKT EESQLVWLHQ LEQLLAERKN ADPDSSYTAS LYARGTKRIS QKVGEEGVEV ALAATSGDKA ELVCESADLM YHLFVLLQDQ GLSFDDVINK LKERHT
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