Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1128 |
Symbol | |
ID | 6986858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1229341 |
End bp | 1230111 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643379508 |
Product | membrane protein |
Protein accession | YP_002262607 |
Protein GI | 209694679 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.24374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTC TTGAACCCTC GACCCTCATT ATTTTAGGGT TAGTTGCTTT TGTCGCTGGA TTTATTGACG CAGTTGCTGG TGGTGGTGGT ATGCTGACGG TTCCAGCATT GCTCTCTATT GGCTTACCCC CACACATTGC ATTAGGCACA AATAAATTAG CGGCTACTTT TGCATCATCG ACAGCGGCAA TCACCTATTT CAAAAAGAAG CTATTTGACC CTCAGTTTTG GAAAGCCTCA TTTATAGCCA CTTTACTTGG TGCAACTTGC GGAACCTTAT TAGTCAATTA TATTTCAACG GAATGGTTAG AAAAAGGCCT ACCTCTTATT ATTCTAGGTG CCGCTATTTA TACGATTTGG CCGAATCGTT TAATCTCTGA GCAGAATCAA TTACCAGAAA AAACACCTAA GTTTAAAAAA CAACAAATCA TCCAAGGGTT GTCTTTAGGT TTTTATGATG GTGTTGCCGG CCCTGGCACT GGTGCATTTT GGACGGTAAG TAGTATGGCA CTTTATCGTC TTAATATCTT ACTGGCTTCT GGTCTCGCTA AAGCCATGAA TTTTACAAGT AATATCACCT CGCTTGTCAC CTTCGCTATC CTTGGCCAGA TAAACTGGGC GCTTGGTTTA ACGATGGGGA TTTGCCTGAT GGTTGGTGCC TTCTTAGGTG CTCATTCTGC TATTCGTTTT GGTTCAAAAT TCATTCGCCC TGTTTTTGTT ACTGTTGTTT GTATTCTCGC GGCTAAACTC GCTTTTGATG CTTGGTTTTA A
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Protein sequence | MEFLEPSTLI ILGLVAFVAG FIDAVAGGGG MLTVPALLSI GLPPHIALGT NKLAATFASS TAAITYFKKK LFDPQFWKAS FIATLLGATC GTLLVNYIST EWLEKGLPLI ILGAAIYTIW PNRLISEQNQ LPEKTPKFKK QQIIQGLSLG FYDGVAGPGT GAFWTVSSMA LYRLNILLAS GLAKAMNFTS NITSLVTFAI LGQINWALGL TMGICLMVGA FLGAHSAIRF GSKFIRPVFV TVVCILAAKL AFDAWF
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