Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1076 |
Symbol | accD |
ID | 6989335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1171682 |
End bp | 1172572 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643379463 |
Product | acetyl-CoA carboxylase subunit beta |
Protein accession | YP_002262563 |
Protein GI | 209694635 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
TIGRFAM ID | [TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTGGC TTGAAAAGAT TTTTAATACA AGCAATATTG TTAGTTCACG TAAAGCATCT ATCCCTGAAG GGGTTTGGAC GAAGTGTACG TCATGTGAAC AAGTGCTTTA TTCAGCAGAG CTAGAGCGTA ATCTAGAAGT ATGCCCAAAA TGTGATCATC ACATGCGTAT GAAAGCTCGT AAGCGCCTAG AAACATTTTT AGATGCGGAA GGTCGTGTTG AGCTTGGTCA AGAATTTGAA CCAAAAGATC TTTTAAAATT TAAAGATTCA AAGCGCTATA AAGATCGTAT TTCAGCAGCA CAAAAATCAA GTAATGAAAC CGATGCGCTT ATCGTAATGC AAGGCACATT GTTAGAATTG CCTATCGTTG CTTGTGCATT TGAATTCTCC TTCATGGGGG GGTCTATGGG TTCAGTTGTC GGCGCTCGCT TTGTTAAAGC GGTTGATGCT GCGATTGAAA ACAACTGTCC ATTAGTGTGT TTCTCTGCAA GTGGCGGTGC TCGTATGCAA GAGGCGCTTA TGTCTCTAAT GCAAATGGCA AAAACAAGTG CGGCACTGGC TCGTTTATCT CGTAAAGGCC TACCATTCTT CTCTGTATTA ACTGACCCTA CAATGGGCGG TGTTTCTGCA AGTTTAGCAA TGCTGGGTGA TATTAATATC GGTGAACCTA AAGCATTAAT TGGCTTTGCT GGTCGTCGTG TTATTGAGCA AACAGTACGT GAAGATTTAC CTGAAGGTTT CCAACGCAGT GAATTTTTAT TAGAGCACGG TGCTATTGAT ATGATTGTTG ACCGTCGTGA AATGCGTCAA CGTATTGGTG GTTTGATGGC TAAAATGACA AACCAAGCAT CACCATTAGT TGTTCCTGTT GATGGTTCTG TAAAAAATTA A
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Protein sequence | MSWLEKIFNT SNIVSSRKAS IPEGVWTKCT SCEQVLYSAE LERNLEVCPK CDHHMRMKAR KRLETFLDAE GRVELGQEFE PKDLLKFKDS KRYKDRISAA QKSSNETDAL IVMQGTLLEL PIVACAFEFS FMGGSMGSVV GARFVKAVDA AIENNCPLVC FSASGGARMQ EALMSLMQMA KTSAALARLS RKGLPFFSVL TDPTMGGVSA SLAMLGDINI GEPKALIGFA GRRVIEQTVR EDLPEGFQRS EFLLEHGAID MIVDRREMRQ RIGGLMAKMT NQASPLVVPV DGSVKN
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