| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1027 |
|---|
| Symbol | |
|---|
| ID | 6986796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1124840 |
|---|
| End bp | 1125715 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643379413 |
|---|
| Product | phage capsid scaffolding protein |
|---|
| Protein accession | YP_002262516 |
|---|
| Protein GI | 209694588 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAA TTAGTGACTG GAAAGTAATA GCAACAGAAG GCCCAACCAT CGACGGGCGT
AAAATTACCC GTGAATGGTT AACCCAAATG GCCGAAAGCT ACGACCAGAA AGAATACACC
TCACTAATTT GGCCTGAGCA TAAACGTTTT AATGGTTATG GTGATAACTG GGGCAAGGTG
GTTGAGTTAA AAGCGGAAGA GCTTGATGGC AAAATGCGCT TGTTTGCAAA GTTACAACCA
AATCAATACT TGCTTGAAGC AAATAAATTT GGGCAAAAGC TATTCACATC TATTGAGCCA
AATCCCGACT ATAAGGGTGA AGGGCGTTGT TACCTAGAAG GGCTCGCAGT GACTGACTCC
CCTGCATCAA CTGGTGTTTC AGAACTTCAC TTTTCACGAA AAGATGGCGA AACCACAAAG
CTAGAATGCA GCGTTTTAGA AGAATTTAAT TTAGATGAAT GCTATTCGCG TAGTGAGCGT
TTCTTTTCAA TTGTTAATGA TTTTTTCAAG TCTGGTGAGC ATTCGCCAGA GCAACCCCAA
GAAGTGGAAC CAGAGGACAC CGATGTGACC GAAGAACAAC TAAAAGTAGC ACTAAAAGAA
CAATTTGGTG TAATGCGTGA AGAGTTAAAA ACAGATCTAA AAAACGAGCT TAAACAAGAG
TTTTCGCTAG AAGCCAAACC ACCAGTTACG CCCCCAGAAA CAGCGCCAGA AGGTACAACG
GTAGAGCAAT TTTCAGCAGC ACTGAAAGAA GCGCTTGAGC CTATTACTGA AAAGCTAGGT
GGGCTTGAAA CTAAGTTCAA TTCTCTTTCG AAAGAAGTAC CAGGACAAGA GCCTAACGGC
GATGGTGCAG CGGAAGATAC GTCTCACTAC GCATAA
|
|---|
| Protein sequence | MPKISDWKVI ATEGPTIDGR KITREWLTQM AESYDQKEYT SLIWPEHKRF NGYGDNWGKV
VELKAEELDG KMRLFAKLQP NQYLLEANKF GQKLFTSIEP NPDYKGEGRC YLEGLAVTDS
PASTGVSELH FSRKDGETTK LECSVLEEFN LDECYSRSER FFSIVNDFFK SGEHSPEQPQ
EVEPEDTDVT EEQLKVALKE QFGVMREELK TDLKNELKQE FSLEAKPPVT PPETAPEGTT
VEQFSAALKE ALEPITEKLG GLETKFNSLS KEVPGQEPNG DGAAEDTSHY A
|
|---|
| |