Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0996 |
Symbol | |
ID | 6986768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1100110 |
End bp | 1101534 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643379384 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_002262487 |
Protein GI | 209694559 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0697135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAGA AACTGCTAAT CAAAACCTGG GGCTGCCAGA TGAACGAATA CGATTCATCT AAAATGGCCG ATCTTTTAGG TGCCGCAAAT GGTTATGAAT TAACTGAAGA TCCAAAAGAA GCGGATGTTC TGTTATTAAA TACCTGTTCA ATTCGTGAAA AAGCACAAGA AAAAGTGTTT CACCAACTGG GCCGCTGGAA ACATTTAAAA GACAAAAAAC CAGACTTAGT GATTGGCGTA GGCGGTTGTG TTGCAACTCA AGAAGGCGAT CATATTCGTC AACGTGCACC TTACGTTGAT GTAATTTTTG GTCCTCAAAC GCTTCACCGT TTACCACAAA TGATCAAACA ATCGCTTTCT AATGAAAAAA CCGTTATGGA TATTTCATTT CCTGAAATCG AAAAATTCGA TAATCTTCCA GAACCAAAAG CCGATGGTGT ATCTGCTTTT GTTTCTATCA TGGAAGGTTG TTCAAAATAC TGTACGTACT GTGTTGTTCC TTATACTCGC GGTGAAGAAG TTAGCCGTCC ATTAGATGAC GTGCTATTTG AAATTGCTCA ACTTGCAGAG CAAGGCGTAC GTGAAGTTAA CCTATTAGGT CAAAACGTAA ATGCTTACCG TGGTCCTATG TACGATGGTG ATATTTGTTC CTTTGCTGAT TTACTTCGTA TGGTTGCTTC AATTGATGGT ATTGACCGTT TACGCTTCAC AACCAGTCAC CCATTAGAAT TTGGTGATGA TATTGTTGCG GTTTACGAAG ATACACCAGA ATTAGTAAGC TTCTTGCATC TACCTGTTCA AAGTGGCTCA GATCGAATCC TAACGATGAT GAAACGTCCT CATACTGCTA TTGAGTACAA GTCAATCATC CGTAAGTTGC GTAAAGCTCG TCCTGACATT TTAATCAGCT CAGATTTCAT CGTTGCCTTC CCTGGTGAGT CAGAAAAAGA CTTCCAAGAT ACAATGAAGC TAATTAAAGA CGTAGACTTT GACATGAGTT ATAGCTTTGT CTTCTCTCCA CGTCCAGGTA CGCCAGCCGC TGATTATCCG TGTGATATTC CAGAGCAAAC GAAAAAAGAT CGCCTTGCTG AGCTTCAACA ACAGATCAGT TTTCAATCTG CACGCTTCTC TCGTCAGATG TTAAATACAG AGCTACGTGC ACTTGTTGAA GGCCCATCAA AAAGAAATCC GATGGAACTA CGAGCTCGTA CTGAAAATAA CCGCGTAGTG AATTTCACAG GCAGTCCAGA ACTCATTGGA CAATTTGTTG ACCTTCATAT TACAGAATCA TTTACTAACT CTTTACGCGG TACCTTAGTT CGTACCGAAA AAGACATGGG ATTACGTGTT GCTGTATCAC CTTCTGAGAT GATAGAGAAA ACTCGCCGTG AAGATGATCT TGGTGTAGGT ACTTTTACGC CATAA
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Protein sequence | MTKKLLIKTW GCQMNEYDSS KMADLLGAAN GYELTEDPKE ADVLLLNTCS IREKAQEKVF HQLGRWKHLK DKKPDLVIGV GGCVATQEGD HIRQRAPYVD VIFGPQTLHR LPQMIKQSLS NEKTVMDISF PEIEKFDNLP EPKADGVSAF VSIMEGCSKY CTYCVVPYTR GEEVSRPLDD VLFEIAQLAE QGVREVNLLG QNVNAYRGPM YDGDICSFAD LLRMVASIDG IDRLRFTTSH PLEFGDDIVA VYEDTPELVS FLHLPVQSGS DRILTMMKRP HTAIEYKSII RKLRKARPDI LISSDFIVAF PGESEKDFQD TMKLIKDVDF DMSYSFVFSP RPGTPAADYP CDIPEQTKKD RLAELQQQIS FQSARFSRQM LNTELRALVE GPSKRNPMEL RARTENNRVV NFTGSPELIG QFVDLHITES FTNSLRGTLV RTEKDMGLRV AVSPSEMIEK TRREDDLGVG TFTP
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