Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0957 |
Symbol | dinB |
ID | 6986743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1053775 |
End bp | 1054689 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643379349 |
Product | DNA polymerase IV |
Protein accession | YP_002262452 |
Protein GI | 209694524 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGTAAAA TCATTCATAT TGATATGGAT TGTTTCTATG CAGCGGTTGA AATGCGAGAT AATCCTGTAT TACGTGACGT TCCTTTGGCC GTTGGTGGAA GTGAAAGACA GCGTGGTGTA TTAAGTACGT GTAACTATCA AGCTAGGAAG TTTGGTCTTC ATTCTGCAAT GCCAACAGGA CGTGCGTTAT CCCTTTGTCC TCACTTAGTG GTTGTACCTG GTCGCATGCA GGTCTACAAG CAAGTCTCTC ATCATATACA CCGTATATTT CGTCGCTATA CCGATAAAAT AGAACCACTC TCTTTAGATG AAGCTTATCT CGATGTTAGT GAATGTACGT TGTTGCATGG TTCGGCGACA TTGATAGCTC AACAAATACG TAGAGACATA TTTAATGAAC TGCAATTAAC CGCATCAGCA GGAATTGCCC CTCTTAAATT TTTAGCTAAA ATCGCTTCTG ATTTAAATAA ACCTGATGGT CAGTATGTGA TTACTCCGAA TATGGTTATG GATGAAATTG ACTCATTACC ATTGGAGAAA ATACCAGGGG TCGGAAAAGT AAGCTTAGAG CGGTTACATC GATCAGGACT GCATACTTGC AAGGACGTCC AACAGTTTGA CCAACGTGAA TTATTATTGT TATTTGGAAA AATGGGGGCT TCATTATGGA AGCGATCTCA TGGAATTGAT GAAAGAGAAG TGATTACAGA GCGTAATCGA AAGTCCGTAG GCGTAGAAAG AACATTTTCT CATAATATCA GCATGTTTGA AGAATGCTGG GAAGTCATTA AAACACGCTT GTATCCTGAA TTAGAGTCGA GACTAATAAA AGCAAATGGT GATAATTATA TTGCTAAGCA AGGTATTAAA ATTAAGTTCG CAGACTTCCA ACATTTTCCT AATGCATGTT TTTAG
|
Protein sequence | MRKIIHIDMD CFYAAVEMRD NPVLRDVPLA VGGSERQRGV LSTCNYQARK FGLHSAMPTG RALSLCPHLV VVPGRMQVYK QVSHHIHRIF RRYTDKIEPL SLDEAYLDVS ECTLLHGSAT LIAQQIRRDI FNELQLTASA GIAPLKFLAK IASDLNKPDG QYVITPNMVM DEIDSLPLEK IPGVGKVSLE RLHRSGLHTC KDVQQFDQRE LLLLFGKMGA SLWKRSHGID EREVITERNR KSVGVERTFS HNISMFEECW EVIKTRLYPE LESRLIKANG DNYIAKQGIK IKFADFQHFP NACF
|
| |