| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0955 |
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| Symbol | |
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| ID | 6988912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1052339 |
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| End bp | 1053376 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379347 |
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| Product | thiamine biosynthesis lipoprotein ApbE precursor |
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| Protein accession | YP_002262450 |
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| Protein GI | 209694522 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGTCA GTGTTACTCA TTTAGTGAAT AGAACCAAAC TGATTTTGTT ATCTTGTTTT
GCTTTACTAC TACTTACCGG TTGTGGTGAA CAACAACGTG AACAAGTGTA TTTAAATGGT
CCAACGATGG GGACAAGCTA TAATATTAAA TTTATTAATA AAGATGGCTT ACCAAAGCAA
GATGTTATTC ATGCAGAGAT AGATAAACGA CTAGAGTTAG TAAATGACCA AATGTCGACG
TACCGTAAAG ACTCAGAACT GAGTCAATTT AATCAGAGTA CAGCATTAAC GCCATTTACG
GTTTCTAAAG ATACAGCCAC AGTGATTAGT GAAGCGATTC GCTTAAATAA AGTCACTTTG
GGTGCATTAG ATATCACGGT TGGTCCTTTA GTTAATATAT GGGGTTTTGG TCCAGAAGCT
CGTCCTGAGG TTGTTCCTAC TGAAGATGAA TTGAATGCTC GTCGTGCTAT TGTCGGTATT
CAGCATTTAA GTGCGACAGA AACAACCGTT ACAAAAGATA TCCCTAACCT TTATGTTGAT
TTATCAACAA TAGCAAAAGG CTGGGGAGTT GACGTTGTTG CTAATTATTT AGAAGGATTA
GGCATTACTG ACTATATGGT CGAAGTCGGT GGTGAAATGC GAGTTAAAGG GAATAATAAA
GAGAATGTTG CTTGGCGTAT CGCGATAGAA AAGCCAACGG TTGATGAACG TTCTATTCAA
GAAATAATAG AACCAGGGCA TCATGCGGTT GCAACGTCTG GTGATTACCG TATTTACTTT
GAAAAAGAAG GTGTACGTTA CTCTCATATT ATTAATCCTA TTACAGGGAA CCCAATAGCA
AATAAAGTTG TCTCAGTTAC AGTACTTGAT AAATCATCAA TGACTGCTGA TGGACTTGCT
ACAGGGTTAA TGGTGTTAGG TGAAGAGCAA GGCATGGCCG TTGCGAATAA ACATAACATT
CCTGTTTTCA TGATTGTGAA AACTAAAAAT GGCTTTAAAG AACTCTCTTC TGAAGCCTTT
AAGCCTTTTT TGAAATAA
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| Protein sequence | MIVSVTHLVN RTKLILLSCF ALLLLTGCGE QQREQVYLNG PTMGTSYNIK FINKDGLPKQ
DVIHAEIDKR LELVNDQMST YRKDSELSQF NQSTALTPFT VSKDTATVIS EAIRLNKVTL
GALDITVGPL VNIWGFGPEA RPEVVPTEDE LNARRAIVGI QHLSATETTV TKDIPNLYVD
LSTIAKGWGV DVVANYLEGL GITDYMVEVG GEMRVKGNNK ENVAWRIAIE KPTVDERSIQ
EIIEPGHHAV ATSGDYRIYF EKEGVRYSHI INPITGNPIA NKVVSVTVLD KSSMTADGLA
TGLMVLGEEQ GMAVANKHNI PVFMIVKTKN GFKELSSEAF KPFLK
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