Gene VSAL_I0885 details

Gene Information

• Locus tag: VSAL_I0885
• Symbol: gmhB
• ID: 6986709
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 988174
• End bp: 988725
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643379286
• Product: D,D-heptose 1,7-bisphosphate phosphatase
• Protein accession: YP_002262389
• Protein GI: 209694461
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0241] Histidinol phosphatase and related phosphatases
• TIGRFAM ID: [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase; [TIGR01656] histidinol-phosphate phosphatase family domain; [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCTAAAC CAGCAATATT TATTGATAGA GATGGCGTGA TTAACGTTGA TCGTGGCTAC 
GTTCATAAGC GTGATGACTT TGAATACATT GATGGTGTGT TCGATGCTGT TAAGATATGC 
AAAGACATGG GCTACTTACT TGTATTAGTG ACCAATCAAT CAGGCATTGC ACGTGGTATC 
TTTACTGAAG AGCAGTTTGA AACATTAACT GAATGGATGG ATTGGAACTT TGCTGAGCAT 
GACATCGATT TTGATGGCAT TTACTATTGT CCGCATCACC CTGAAGCGAC AGTAGAACAG 
TACAAAGAAG AGTGTGATTG TCGTAAACCA AATCCTGGTA TGTTCATGTC AGCTCAAAGC 
TTCTTAGATA TCGACATGGA AAAATCTGTG ATGATCGGTG ATAAGAAAGA AGACATGATG 
GCAGCTCAAG TGGCTGGCGT TGGTACACGT ATTCTTGTTC GTACGGGTAA ACCTGTAACA 
GAAGAAGGCG AAGCATTAGC AACAACGGTA CTTGATAGTA TTGCGGATGT GCCTAAGTTT 
TTATTTGCTT AA 

 

Protein sequence

MSKPAIFIDR DGVINVDRGY VHKRDDFEYI DGVFDAVKIC KDMGYLLVLV TNQSGIARGI 
FTEEQFETLT EWMDWNFAEH DIDFDGIYYC PHHPEATVEQ YKEECDCRKP NPGMFMSAQS 
FLDIDMEKSV MIGDKKEDMM AAQVAGVGTR ILVRTGKPVT EEGEALATTV LDSIADVPKF 
LFA