| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0879 |
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| Symbol | |
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| ID | 6986703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 981768 |
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| End bp | 982646 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379280 |
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| Product | transcriptional regulator, LysR-family |
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| Protein accession | YP_002262383 |
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| Protein GI | 209694455 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTA AATTACAACA ATTAAAACAT TTTACTTTAG TCGTAGAAGA AGGCGGGTTT
CGTGCCGCCT CTGGCCGTGC AAATCGATCG CAAGCCGCAC TATCAACCTC AATTAAAGAA
CTCGAACGAA TTTTAGAACA ACCTTTATTT GAAGCCGGAA ACAAATCAAA ACTAACGCCT
TTTGGTGAAA TTTGCTTTCC AAAAATAACT CAGTTTTTAG ACGTCTATGA CCGACTCACT
AATGATTTAC GTGCGGATGC CGCAGGACAA CAAGGACGCG TTCGGATTGC CAGTGTTCCT
TCTGTTGCCG CAAAATTAAT CCCGAGTGTG CTAGGCGCAT TCAGTGAAAA ATACCCTAAC
GTAGAAGTCA GCCTAATTGA TGACAATGCC GCAGGTGTAG AAGCTCGCCT ACTGTCAGGA
GAGGTCGATT TAGCGCTAGG AAATTATTCA CAATTGGAAG AAAAAGCCAT TCACTTTACC
CCGTTGATAA GCGATCCTAT TGGTGTTGTC TGCTTAAAAG ACAATCCTAT CGCCACTCAT
CCTGAAGGGA TCGAATGGAA AACATTACTT AAACAAACTT TCATTAGAAA CGGAACTTGT
ACATTGCTTA ACTCAACACC AGCTCGAGTA CTCAGTGAGC AAGCCTTATA TTCTGTTGAA
AACATTACTT CTTTATTTTC AATATTAGAA TTAGGAATAG GAATAACGAC ACTTCCGAAA
TTAGCCTTCC CAACCAATGA GACTCGTTTA GTGTGGATCC CTCTTATCGA TCCTCCATTA
GAGCGACAAA TTGGCATATT TCAACTCGCT GATAGAACTA TTTCGCCACA AGCACAGCAG
TTTTATGATC TTTGCATTCA ATATTTAAAT TATAAATAA
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| Protein sequence | MSIKLQQLKH FTLVVEEGGF RAASGRANRS QAALSTSIKE LERILEQPLF EAGNKSKLTP
FGEICFPKIT QFLDVYDRLT NDLRADAAGQ QGRVRIASVP SVAAKLIPSV LGAFSEKYPN
VEVSLIDDNA AGVEARLLSG EVDLALGNYS QLEEKAIHFT PLISDPIGVV CLKDNPIATH
PEGIEWKTLL KQTFIRNGTC TLLNSTPARV LSEQALYSVE NITSLFSILE LGIGITTLPK
LAFPTNETRL VWIPLIDPPL ERQIGIFQLA DRTISPQAQQ FYDLCIQYLN YK
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