| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0857 |
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| Symbol | dcuC |
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| ID | 6986688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 956160 |
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| End bp | 957527 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379261 |
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| Product | C4-dicarboxylate transporter DcuC |
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| Protein accession | YP_002262364 |
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| Protein GI | 209694436 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3069] C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00771] c4-dicarboxylate anaerobic carrier family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.510054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGAGT TAATGATTGG TTTAGTGATC ACCGTTTTGG TTGGTTACTT TATTGTCAAA
GGATATAAGG CTGCCGGTGT TCTACTGACT GCGGGTTTAG CGTTATTAAT GATTGCGGGT
TTATTAGGCC ATACTGTTTT ACCGGCTAAA GTTGCGACAA CAGGTAACTT ATTAACCGAC
GCATTAGAAT ACGTGAAATA CATGCTGCAA TATCGTGGGG GCGGCTTGGG TATGCAAATC
ATGCTACTTT GTGGTTTTGC TTCTTATATG ACTCACATTG GCGCAAATAA TGTCGTTGTT
AAACAATTTT CTAAACCATT AGCATTTATT AAATCACCTT ATGTGTTACT TGTAGCGGCT
TACATTGTGG CATGTTTAAT GTCCCTTGCT GTAAGTTCGG CAACAGGTCT TGGTGTGCTG
TTAATGGCAA CCCTTTTCCC AATGATGACA GCAATGGGTA TTTCTCGCCC AGCAGCAGTA
GCCGTTTGTG CTTCACCAGC CGCAATCATT CTTTCTCCGA CTTCTGGTGA TGTTATTGTT
GCAGCAGAAA AGTCTGGCCT TCCTTTACAT ACCTTTGCGG TTGAAACGGT ATTACCTGTT
TCTATCTGTG CAATCATTGT AATGGCCGCC GCCGCTTTCT TCTGGAACAA GTATCTAGAT
AAGAAAGAAA ACACGCCAAT GGAAAAAGTG GATATTTCGG CAATGGAAGT AAACGCGCCG
TCTTATTACG CGATTTTGCC TTTCTTGCCA ATTGTGGGTG TTTTTATCTT CAACGGCCAA
ACTATCCCTG GTTTATCTTT AGATATTTAT ACTATCGTTG TAGCGTCTAT CTTTATTGGC
GCGATCGTCA ATTTCATTAC TAACCGCTTT AACGGCAGAG CAACACTTGA AGATTTAGAA
TCATGCTACG AAGGCATGGC CGATGCATTT AAAGGCGTGG TAATGCTATT GGTAGCCGCT
GGCGTATTTG CACAAGGTCT AATGTCAGTA GGTGCCATTG ATAACCTACT TCACCTTGCT
GATTCTGCTG GTGCTGGTGG TATGGCGTTA ATGCTTCTTC TTACTGGTTT AACCGTAGCC
GCTGCAATTG CTACCGGTTC TGGTAACGCA CCATTTTATG CCTTTGTTGA GCTTGCTCCA
CAACTTGCTG ATAAAATGGG TCTAAGCCCT GCATTCTTAA TCATTCCGAT GCTTCAAGCA
TCTAACCTTG GTCGTACTAT TTCACCGGTA TCTGGTGTTA TTGTTGCGAC ATCTGGTATG
GCTAAAATCA GTCCATTTGA AGTAGTTAAA CGTACCTCTG TTCCTGTTAT CTGCGGTTTA
ATTACGGTTA TCGTAGGCAC AATGGTACTG GTTCCTATGT ACGTATAA
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| Protein sequence | MLELMIGLVI TVLVGYFIVK GYKAAGVLLT AGLALLMIAG LLGHTVLPAK VATTGNLLTD
ALEYVKYMLQ YRGGGLGMQI MLLCGFASYM THIGANNVVV KQFSKPLAFI KSPYVLLVAA
YIVACLMSLA VSSATGLGVL LMATLFPMMT AMGISRPAAV AVCASPAAII LSPTSGDVIV
AAEKSGLPLH TFAVETVLPV SICAIIVMAA AAFFWNKYLD KKENTPMEKV DISAMEVNAP
SYYAILPFLP IVGVFIFNGQ TIPGLSLDIY TIVVASIFIG AIVNFITNRF NGRATLEDLE
SCYEGMADAF KGVVMLLVAA GVFAQGLMSV GAIDNLLHLA DSAGAGGMAL MLLLTGLTVA
AAIATGSGNA PFYAFVELAP QLADKMGLSP AFLIIPMLQA SNLGRTISPV SGVIVATSGM
AKISPFEVVK RTSVPVICGL ITVIVGTMVL VPMYV
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