| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0838 |
|---|
| Symbol | seqA |
|---|
| ID | 6986684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 932392 |
|---|
| End bp | 932934 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643379242 |
|---|
| Product | replication initiation regulator SeqA |
|---|
| Protein accession | YP_002262345 |
|---|
| Protein GI | 209694417 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3057] Negative regulator of replication initiationR |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAA TTGAAGTAGA TGAAGAACTA TACCGCTTTA TTGCGAGCCA AACTCAACAC
ATCGGTGAAA GTGCCTCTGA TATTTTACGT CGTATCTTAA TGCAATCATC CGCAACTGAA
CTTGTTGTTA CAGCGCCTTC TGCTGTTATC AAACGAGGCA TTGTAGTTAG TAAAGATGCC
GGCAAAGAGA GCTCTGTTGA TCGAGTGAAA GCAGTACGTA CCTTATTAAT TTCTGATGAA
TTCTCCTCAC TAGATAAAGC GATCGATCGC TTTTTAACTG TATTATCAGA ATTATATACC
ATTGACTCTA AAGCTTTTTC TGAAGCAACA GAAGTTAAAG GTCGAACTCG AGTTTATTTT
GCTGATAATC AAGATACCTT AATAGCAAGT GGTAAAACGA CTAAGCCTCG AGAAATCAAA
GGAACGCCTT TCTGGGTTAT TACAAACACG AATACTAATC GCAAGCGCCA CATGGTTGAA
TTATTAATGG AACGTATGGG TTTCCAACAT GACTTAACAG AAAAAGTGTG CGCGGCGATT
TAA
|
|---|
| Protein sequence | MKTIEVDEEL YRFIASQTQH IGESASDILR RILMQSSATE LVVTAPSAVI KRGIVVSKDA
GKESSVDRVK AVRTLLISDE FSSLDKAIDR FLTVLSELYT IDSKAFSEAT EVKGRTRVYF
ADNQDTLIAS GKTTKPREIK GTPFWVITNT NTNRKRHMVE LLMERMGFQH DLTEKVCAAI
|
|---|
| |