| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0798 |
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| Symbol | nirB |
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| ID | 6988898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 882766 |
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| End bp | 885342 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643379203 |
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| Product | nitrite reductase (NAD(P)H) large subunit |
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| Protein accession | YP_002262308 |
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| Protein GI | 209694380 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA TGAAACTAGT CATCATCGGT AATGGCATGG TCGGTCATCC CTACATCGAA
GATTTAGTAG AGAAAACTGA TGTTCAAAAC ATGGATATCA CCGTGTTCTG TGAAGAACCA
CGTGTCGCTT ATGACCGTGT TCACCTCTCT TCTTACTTTT CTCACCACAC GGCTGATGAG
CTCTCTCTTG TAAAAGAAGG ATTCTATGAC AAACACGGTA TCAACGTATT AATCGGCGAA
CGCGCTATTA ATATTAACCG TGAAAACAAA ATTGTATATT CAAGCACTGG TCGTGAAATC
CAATACGACA AACTCGTCCT TGCTACGGGC TCTTTCCCAT TCGTACCGCC AATCAAAGGC
AACGAAAGCA AAGACTGTTT TGTTTACCGT ACTATTGAAG ATCTTAAATC AATCGAAGCC
ACGGCGAAAA AAAGTAAAAG CGGTGTTGTT ATCGGTGGTG GCCTCCTTGG TCTTGAAGCG
GCTGGCGCAT TAAAAGCACT TGGCGTAACA ACTCATGTTG TCGAATTTGC ACCTGTATTA
ATGGCTGAGC AGCTTGATTT ACAAGGTGGC TTACAACTTC GTAATAAAAT TGAACGCATG
GGTGTTCAAG TTCATACCGG TAAAAACACA TTAGAAATAG CACCTGAAGG CACAGAAGCA
CGTAATGTAA TGCGTTTTGC TGATGGTACA GAGCTTGAGA CTGACTTCAT TGTCTTCTCT
GCTGGCATCC GCCCTCAAGA TAAGCTTGCT CGCCAAATGG AGCTTGATAT CGCTTCTCGT
GGTGGTATTG CGATTAACAA CAACTGCCAA ACTTCAGATG AACACATCTA CGCGATTGGT
GAATGTGCGT CATGGAATCA AACTTTCTAT GGTCTTGTCG CTCCAGGCTA CAAAATGGCA
ACCGTTGCAG TTGATCACTT AGTTGGTAAC GACAGTACGT TTGAAGGCGC TGACATGAGC
GCAAAACTAA AACTTCTTGG TGTGAAGGTT GGCTCTATTG GGGATGCAAA CGGTCGTACT
CCTGGTTGTA AGAGCTACGT TTACCAAAAC GAAGAAGACG AAGTTTATAA ACGCATTATC
GTATCTGAAG ATGGTAAGAA ACTACTTGGC GCAGTAATGG TTGGTGATAC TTCAGATTAC
GGCGATCTAC TTCAGCTTAA ACTGAACGAC ATTGATTTAC CTGATCACCC CGACCTTCTT
ATTCTTCCAG CTCACGCTGG TGCAGAAAAG CCGTCTTTAG GCGCAGACTC TCTGCCTGAA
ACTGCCGTGA TTTGTTCATG TTTTGATGTA ACGAAAGGCA AAATTGCTCA AGCAGTTGCA
AATGGCAATC ACACAATGGC TGAAATTAAA GCCGTGACTG GCGCCGGTAC AGGTTGTGGC
GGTTGTCTTC CTCTTGTCGC ATCGGTTCTT AATGCTGAAT TGGCTAAATC AGGCATCGAA
GTTAAAAACG ACGTTTGTGA GCACTTTGCT TATTCTCGCC AAGAGTTATT CCACCTAATT
CGCATCGAAG AAATCAAGAC ATTCGATGAA CTATTAGAGA AATACGGTAA AGGTTACGGC
TGTGAAGTGT GTAAACCACT AGCGGGATCT ATCCTTGCTT CTTGTTGGGG TGAGCACATC
CTTAAACCAG CATTGGTTAA ACTGCACGAT ACCAACGATA ACTTCCTAGG TAACATTCAA
AAAGATGGTA CTTACTCTGT CATTCCACGT ATGGCTGGCG GTGAAGTCAC ACCACAAGCA
CTAGGTGCAT TAGCGGCCGT TGCTGCTGAA TATAACCTTT ATACTAAAAT TACGGGTGCT
CAACGTATCG GTCTATTCGG TGCTCAAAAA GACGATCTTC CAACCATATG GAAAAAACTC
ATTGAAGCAG GTTACGAGAC AGGACAAGCT TACGGTAAAG CCTTACGTAT GGCTAAGACG
TGCGTTGGTT CAACATGGTG TCGTTACGGT GTCCAAGACT CTGTAGGCTT GGGCGTCACA
CTTGAGAATC GCTACAAAGG TATCCGTACT CCCCATAAAA TGAAATTTGG TGTCTCGGGT
TGTACTCGTG AGTGTGCAGA AGCACAAGGT AAAGATTTAG GCATTATTGC AACAGATGCA
GGTTGGAACA TGTACGTGTG TGGTAATGGG GGGATGAAAC CTCGCCATGC TGACTTATTG
GCAACGGATC TAGACCAAGA AACGCTGATT AAATACATCG ACCGTTTCAT GATGTTCTAC
ATTCGAACAG CCGCTCCACT GCAACGTACC TCTGTATGGA TGGATAACCT TGAAGGTGGC
GTTGATTATT TACGTGAAGT GATTGTGGAT AATAAGCTTG GCATTAACGA CCAACTTGAA
ACCGATGTTG CATCACTGAT TAATAACTTC AGCTGTGAAT GGACAGACAC CATTAACGAT
GAAGCTCAAC TAAAACGTTT CTCCCACTTC ATTAACTCTG AAGAACGCGA TGATAATGTT
GTGTTTGTTT CTGATGGCCG TGAACAACAC CGCCCTGCAA CGTACACAGA AAAAAATCCA
AACGCGAAAG GCGATATATT GCATGTTGCT CTAACTGACA CAAGTGTGGA GAAATAA
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| Protein sequence | MSKMKLVIIG NGMVGHPYIE DLVEKTDVQN MDITVFCEEP RVAYDRVHLS SYFSHHTADE
LSLVKEGFYD KHGINVLIGE RAININRENK IVYSSTGREI QYDKLVLATG SFPFVPPIKG
NESKDCFVYR TIEDLKSIEA TAKKSKSGVV IGGGLLGLEA AGALKALGVT THVVEFAPVL
MAEQLDLQGG LQLRNKIERM GVQVHTGKNT LEIAPEGTEA RNVMRFADGT ELETDFIVFS
AGIRPQDKLA RQMELDIASR GGIAINNNCQ TSDEHIYAIG ECASWNQTFY GLVAPGYKMA
TVAVDHLVGN DSTFEGADMS AKLKLLGVKV GSIGDANGRT PGCKSYVYQN EEDEVYKRII
VSEDGKKLLG AVMVGDTSDY GDLLQLKLND IDLPDHPDLL ILPAHAGAEK PSLGADSLPE
TAVICSCFDV TKGKIAQAVA NGNHTMAEIK AVTGAGTGCG GCLPLVASVL NAELAKSGIE
VKNDVCEHFA YSRQELFHLI RIEEIKTFDE LLEKYGKGYG CEVCKPLAGS ILASCWGEHI
LKPALVKLHD TNDNFLGNIQ KDGTYSVIPR MAGGEVTPQA LGALAAVAAE YNLYTKITGA
QRIGLFGAQK DDLPTIWKKL IEAGYETGQA YGKALRMAKT CVGSTWCRYG VQDSVGLGVT
LENRYKGIRT PHKMKFGVSG CTRECAEAQG KDLGIIATDA GWNMYVCGNG GMKPRHADLL
ATDLDQETLI KYIDRFMMFY IRTAAPLQRT SVWMDNLEGG VDYLREVIVD NKLGINDQLE
TDVASLINNF SCEWTDTIND EAQLKRFSHF INSEERDDNV VFVSDGREQH RPATYTEKNP
NAKGDILHVA LTDTSVEK
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