| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0794 |
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| Symbol | kdsA |
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| ID | 6986668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 879657 |
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| End bp | 880511 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379199 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_002262304 |
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| Protein GI | 209694376 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.281219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC AAAAAACAGT AAAAATTGGC AATATCGATG TAGCAAATGA TAAGCCGTTT
ACCTTATTTG CAGGTATGAA TGTATTAGAG TCTCGTGATT TGGCTATGCG CATGTGTGAG
ACTTACGTAG AGATCACTGA TCGATTAGGC ATCCCATACG TATTTAAAGC GTCTTTTGAT
AAAGCAAACC GTTCGTCAGT TCATTCGTAC CGTGGTCCTG GTATGGAAGA AGGTCTAAAG
ATTTTTCAAG AATTGAAAGA TACGTTTGGT GTGAAAATCA TTACGGATAT TCATACAGAG
GCACAAGCTC AACCTGTTGC TGATGTGGTG GACGTTATTC AACTTCCTGC TTTCCTTGCT
CGTCAAACTG ATTTAGTTGA GACAATGGCT AGAACGGGTG CTGTCATTAA CGTGAAAAAA
CCACAATTCA TGAGCCCTGA TCAAGTCGGC AATATTGTTG ATAAGTTTGC TGAGTGTGGT
AATGAAAATA TCATTCTTTG TGAGCGTGGT TCATGCATGG GTTATGACAA CCTAGTGGTT
GACATGCTTG GCTTTGGTGT GATGAAAAAA GTATCAAATG GCAGCCCAAT CATTTTTGAT
GTGACGCATT CTTTACAGAA TCGCGATCCA AGTGGTAAAG CATCTGGTGG TCGTCGTTCA
CAAACGGTTG AACTTGCTAA AGCAGGTTTA GCGACGGGTA TTGCTGGGTT ATTTATTGAA
GCTCACCCAA CGCCAGATAA AGCACTGTGT GACGGTCCTT CTGCATTACC ATTAGATCAA
CTAGAACCTT TCTTAAAACA AATGAAAGCG TTAGATGACT TAATTAAAGG CTTTGAGCAC
ATCGATATTA AATAA
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| Protein sequence | MQNQKTVKIG NIDVANDKPF TLFAGMNVLE SRDLAMRMCE TYVEITDRLG IPYVFKASFD
KANRSSVHSY RGPGMEEGLK IFQELKDTFG VKIITDIHTE AQAQPVADVV DVIQLPAFLA
RQTDLVETMA RTGAVINVKK PQFMSPDQVG NIVDKFAECG NENIILCERG SCMGYDNLVV
DMLGFGVMKK VSNGSPIIFD VTHSLQNRDP SGKASGGRRS QTVELAKAGL ATGIAGLFIE
AHPTPDKALC DGPSALPLDQ LEPFLKQMKA LDDLIKGFEH IDIK
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