Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0791 |
Symbol | hemK |
ID | 6989003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 877583 |
End bp | 878449 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379196 |
Product | protein methyltransferase HemK |
Protein accession | YP_002262301 |
Protein GI | 209694373 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.012343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTT CTATTGAAGC GCTATTAATG CGTTCAATTC AATTGCTGAA ACTTGAGGGG AGTGATTCTC CTCAAGTTGA TGCTGCTGTA TTGCTGTGTC ATGTTTTAGA TAAGCCAAGA AGCTACTTAC TTACTTGGCC TGAAAAGCTC GTCGCTGAAA CCGAATACAA TGCATTTGAA TCATTATTAT CTCGACGCCT TTCTGGTGAA CCAATCGCTT ACATTATTGG TTATCGAGAG TTTTGGTCAT TACCGTTAAA AGTCTCGCCA ACAACATTAA TTCCTCGTCC TGATACTGAA CGTTTGGTAG AAGTTGCGTT AGAGCATCTA TCGCCATCAT CTGAAAAGGT ATTGGATTTG GGGACGGGAA CAGGAGCCAT TGCATTAGCT ATCGCCTCTG AAATGCCTGA TATGTGTGTT ATTGGTGTTG ATTATCAATA TGACGCGGTT GCGTTAGCGA AAGATAATGC CAAAGACAAC AATATATTGA ATACTGAATT TCGTCAGGGA AGTTGGTTTG ATCCGATTAG AATGGATGAA CAGTTTTCAA TTATTGTGAG TAACCCGCCT TATATTGATG GGAATGATCC CCATTTGTCT CAAGGTGATG TACGGTTCGA GCCTCAAACC GCTTTGGTTG CTGAGAAAGA AGGTTTTGCG GACTTAATCC ATATTATGGA GCACAGTCGT ACTCATTTAG TTGAGAACGG TTGGTTATTA ATGGAACATG GCTTTGAACA AGGTAAGCAA TTACGTGATT ACTTTGAAGA ATATGGCTTC ATTAATGTTA AAACAGAACA AGATTACGCT GGCAATGATC GAGTTACATT AGGTCAGTGG ATCACAAACA CAGAGAATAA AGGATAA
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Protein sequence | MSISIEALLM RSIQLLKLEG SDSPQVDAAV LLCHVLDKPR SYLLTWPEKL VAETEYNAFE SLLSRRLSGE PIAYIIGYRE FWSLPLKVSP TTLIPRPDTE RLVEVALEHL SPSSEKVLDL GTGTGAIALA IASEMPDMCV IGVDYQYDAV ALAKDNAKDN NILNTEFRQG SWFDPIRMDE QFSIIVSNPP YIDGNDPHLS QGDVRFEPQT ALVAEKEGFA DLIHIMEHSR THLVENGWLL MEHGFEQGKQ LRDYFEEYGF INVKTEQDYA GNDRVTLGQW ITNTENKG
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