Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0786 |
Symbol | prs |
ID | 6989027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 872539 |
End bp | 873537 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643379191 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_002262296 |
Protein GI | 209694368 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000113332 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACATA TAAAATTCTC ACAATTTGGA CGCAACCCTG AGGTTTCCAC CGTGCCTGAC ATGAAGCTAT TTACTGGTAA TGCAACTCCT GAACTTGCCC AACGTATCGC CGAACGACTA TACATTTCAC TTGGCGACGC TACTGTAGAT CGTTTTTCTG ACGGTGAAGT AGCCGTTCAA ATTAACGAAA ACGTACGTGG TAGTGATGTA TTCATTATCC AGTCTACGTG TGCTCCTACT AATGACAACA TCATGGAATT AGTAGTAATG ATCGATGCAC TTCGCCGTGC TTCTGCAGGT CGTATTACTG CGGTAATTCC TTACTTTGGC TATGCTCGTC AAGACCGTCG TGTACGTTCT GCTCGTGTAC CAATCACTGC AAAAGTTATT GCTGATATGC TTTCAAACGT TGGTGTTGAC CGCGTTTTAA CTATCGACTT ACACGCTGAA CAAATTCAAG GTTTCTTCGA CGTACCAGTA GATAACATCT TCGGTACTCC AGTATTACTT GATGATATGC GTACTCGTGG TTTAGAAAAC CCTGTTGTTG TTTCTCCTGA TTTAGGTGGT GTTGTACGTG CCCGTGCTAC TGCTAAAGCA TTAGGTGATG TAGACATCGC TATCGTTGAT AAGCGTCGTC CACGTGCTAA CGTTTCAGAA GTAATGAACC TTATTGGTGA TGTTGACGGC CGTGACTGTG TTATCGTTGA TGACATGATC GATACGGGCG GCACATTATG TAAAGCAGCT GAAGCACTAA AAGAACGCGG CGCAAAACGT GTATTCGCTT ACGCAACTCA CGCTGTTTTC TCTGGCACTG CTGCACATAA CATTGCAAAC TCAGTAATAG ACCAAGTTGT TGTAACGGAT TCAATCCCTC TATCTAAAGA GATGGCAGCG ACAGGCAAAG TAACTGAACT AAGCCTATCT CGTATGCTAG CTGAAGCAAT TCGTCGCATT AGCAACGAAG AGTCTATATC GGCAATGTTT GATCACTAA
|
Protein sequence | MQHIKFSQFG RNPEVSTVPD MKLFTGNATP ELAQRIAERL YISLGDATVD RFSDGEVAVQ INENVRGSDV FIIQSTCAPT NDNIMELVVM IDALRRASAG RITAVIPYFG YARQDRRVRS ARVPITAKVI ADMLSNVGVD RVLTIDLHAE QIQGFFDVPV DNIFGTPVLL DDMRTRGLEN PVVVSPDLGG VVRARATAKA LGDVDIAIVD KRRPRANVSE VMNLIGDVDG RDCVIVDDMI DTGGTLCKAA EALKERGAKR VFAYATHAVF SGTAAHNIAN SVIDQVVVTD SIPLSKEMAA TGKVTELSLS RMLAEAIRRI SNEESISAMF DH
|
| |