| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0747 |
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| Symbol | |
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| ID | 6988223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 834157 |
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| End bp | 835029 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379146 |
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| Product | HTH-type transcriptional regulator, LysR-family |
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| Protein accession | YP_002262263 |
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| Protein GI | 209694335 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.796071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTAATT GGGAAGGGGT AACAGAATTT GTTGCTGTAG CAGAAGCGCA AAGTTTTACT
GGGGCAGCAA AAGCACTGGA TACTTCAGTA GCACAAATTA GTCGTAAAGT CGCTGCATTA
GAAGAACGTT TATCGATAAA ACTTTTAATA CGAACGACTC GAAAAGTATC AGTAACCGAA
GCTGGACAAA CTTATTACCA ACATTGTCGT CATTTAGTTG AAGGCTTAAA ACAAGCAGAT
AGAGCGATTA CTGAATTAAA TGCGACCCCT CAAGGGCGTT TAAAAATCAC GTCATCAGTC
ACGTATGGTG AGCAGCTTAT CGCGCCATTG CTTAGCGATT TCATGCTCAT GTATCCACAA
CTTGAACTTG AACTTGTGTT ATCAAATCAA ACGTTCGATC TCGTTGAGCA AGATTTTGAT
TTGGCGATTC GTTTAGGTCG ATTAAGTGAT TCAACAATGA TGGCAAAACG CTTATCTAGC
CGACAAGTAC GGGTATGCGC ATCGCCTGCT TATATTGAAA AATATGGTGA ACCACATACC
TTGTCTGAAC TTTCTCAGCA TAATTGTTTA GTTGGCAGCT TGCCTATTTG GCGATTCATT
GAAAATAAAA AAGAAAAAAG CGTAAGAGTA AAGGGATCGG TTCATTGCAA TAGTGGCGCA
GCCCTAACGA ATGCCGCTTT AAAAGGATTA GGCATTGTTC AGTTACCTGA TTTTTATGTT
CAAGAATCAA TGGATAAAGG GGAATTAGTC GAAATACTGG TTCCATATAG AGAGCCTAAA
GAAGGTATTT GGGCGGTATA TCCAAACAAT CGACACCTTT CAACAAAAGT TCGTTTATTG
GTTGAGTTCT TAGCAAAAGA GTTAGCAGAA TAG
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| Protein sequence | MINWEGVTEF VAVAEAQSFT GAAKALDTSV AQISRKVAAL EERLSIKLLI RTTRKVSVTE
AGQTYYQHCR HLVEGLKQAD RAITELNATP QGRLKITSSV TYGEQLIAPL LSDFMLMYPQ
LELELVLSNQ TFDLVEQDFD LAIRLGRLSD STMMAKRLSS RQVRVCASPA YIEKYGEPHT
LSELSQHNCL VGSLPIWRFI ENKKEKSVRV KGSVHCNSGA ALTNAALKGL GIVQLPDFYV
QESMDKGELV EILVPYREPK EGIWAVYPNN RHLSTKVRLL VEFLAKELAE
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