Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0716 |
Symbol | |
ID | 6989433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 801764 |
End bp | 802270 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643379116 |
Product | HTH-type transcriptional regulator |
Protein accession | YP_002262233 |
Protein GI | 209694305 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA CTTCGAAAGG AAGGTATGCA GTAACGGCAA TGCTTGATGT TGCACTGCAT GCTCAAGAAG GGCCTGTGCC ACTTGCCGAT ATATCGGAAC GACAGGGAAT TTCATTATCT TATCTTGAAC AATTATTCTC TAAATTACGC AAAGCTGGTT TAGTTGCTAG TGTTCGAGGT CCAGGTGGTG GTTATCGCTT AGGATTAAAA CCAGATGAAA TTGCGGTTGG AATGGTTATT TCGGCGGTTG ATGAATCGGT TGATGCAACT AAGTGCCATG GTAAAGAAGG TTGTCAAGGT GGCACGCGTT GTTTAACGCA CACATTGTGG CGTGATTTAA GTTCACGTAT CAGTAGCTTC TTAGATGGTA TAAGCCTTGG TGAGTTGATG GTTGATAATG AAGTTCAACA AGTATCAGAT CGACAAAACA TCGATGCAGC CTTAAATAAT GGGTTAGTAA CGAATTCAAA ATTAACAAAT TCTGTGGGTG TTAATGTCCG CTTTTGA
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Protein sequence | MKLTSKGRYA VTAMLDVALH AQEGPVPLAD ISERQGISLS YLEQLFSKLR KAGLVASVRG PGGGYRLGLK PDEIAVGMVI SAVDESVDAT KCHGKEGCQG GTRCLTHTLW RDLSSRISSF LDGISLGELM VDNEVQQVSD RQNIDAALNN GLVTNSKLTN SVGVNVRF
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