| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0648 |
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| Symbol | ffh |
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| ID | 6986584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 721225 |
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| End bp | 722610 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379043 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_002262167 |
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| Protein GI | 209694239 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.773728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA ATTTAACGGA TAGACTATCC AAAACCCTGA AAAACATCAG TGGTAAAGGT
CGATTAACAG AAGAAAACAT TAAAGAAACG CTACGTGAAG TTCGTATGGC TTTGTTAGAA
GCAGACGTTG CTTTACCTGT TGTTCGTGAC TTTGTTAAGC GAATAAAAGA AAACGCCGTA
GGGGTTGAGG TATCAAAAAG CCTAACACCG GGTCAAGAAT TCATTAAAAT CGTTCAGTCT
GAGCTAGAAG CGATAATGGG AGACTCAAAT GAGGCTCTAA ATTTAGCGTG TCAGCCGCCT
GCGGTTATTT TAATGGCAGG TTTACAAGGT GCAGGTAAAA CAACCAGTAC TGGTAAATTA
GCGAAGCTAT TAAAAGAAAG AGATAAAAAG AAAGTTTTAG TTGTGTCTGC CGATGTATAC
CGTCCTGCGG CAATTAAACA GCTAGAAATG TTAGCGTCAG AAGTTGATGT CGATTTCTTC
CCATCAAGTG CAGATCAAAA ACCGATTGAT ATTGTTGATG GTGCAATTAG CCACGCTAAG
TTAAAGTTTT TTGATGTTGT TATCGTTGAT ACGGCTGGTC GTCTAGCTGT TGATACTGAA
ATGATGGAAG AAATTAAGCA GCTTCATGCA CATGTAAATC CAATTGAAAC GTTATTTGTT
GTCGATGCAA TGACGGGGCA AGATGCCGCT AATACGGCAA AAGCGTTTGG TGATATTTTA
CCACTTACGG GTGTTATTCT AACCAAAGTA GACGGTGATG CTCGTGGTGG TGCTGCATTA
TCTGTTCGTC ACATTACGGG CAAGCCAATT AAATTCTTAG GTGTCGGTGA AAAAACGGAT
GCACTAGAAC CTTTCCACCC AGAACGTATT GCTTCTCGTA TTTTAGGTAT GGGTGATGTT
CTTTCTCTAA TTGAAGATCT AGAGAAGAAC GTAGATAAAG AAAAAGCAGA ACGATTAGCG
AAAAAGTTCA AAGAGAAGAA AGGTTTTGAT CTTGAAGATT TTCGTGAGCA GCTTGGTCAG
ATGACAAATA TGGGTGGCAT GATGGGGATG ATGGATAAGC TTCCTGGTAT GTCTCAGCTA
CCTGCTAATG TCAAAGATAA AGTGGACGAC AAAATGTTCA ATCAAATGGA AGCCATTATT
AATTCCATGA CAATGAAAGA ACGCCAGCGT CCTGAACTAA TTAAAGGCTC ACGTAAAAAA
CGTATTGCAG CAGGTTCTGG TACTCAAGTA CAAGATGTGA ATCGCATGCT GAAACAGTTT
ACTCAAATGC AGAAAATGAT GAAAAAAATG CAGAAAGGTG GCATGAAAGG CATGATGCGT
AATATGCAAG GCATGATGGG CGGAATGGGC GGAATGGGCG GTGGTATGGG TGGCTTTGGC
CGCTAA
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| Protein sequence | MFDNLTDRLS KTLKNISGKG RLTEENIKET LREVRMALLE ADVALPVVRD FVKRIKENAV
GVEVSKSLTP GQEFIKIVQS ELEAIMGDSN EALNLACQPP AVILMAGLQG AGKTTSTGKL
AKLLKERDKK KVLVVSADVY RPAAIKQLEM LASEVDVDFF PSSADQKPID IVDGAISHAK
LKFFDVVIVD TAGRLAVDTE MMEEIKQLHA HVNPIETLFV VDAMTGQDAA NTAKAFGDIL
PLTGVILTKV DGDARGGAAL SVRHITGKPI KFLGVGEKTD ALEPFHPERI ASRILGMGDV
LSLIEDLEKN VDKEKAERLA KKFKEKKGFD LEDFREQLGQ MTNMGGMMGM MDKLPGMSQL
PANVKDKVDD KMFNQMEAII NSMTMKERQR PELIKGSRKK RIAAGSGTQV QDVNRMLKQF
TQMQKMMKKM QKGGMKGMMR NMQGMMGGMG GMGGGMGGFG R
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