| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0643 |
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| Symbol | gshA |
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| ID | 6986581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 716044 |
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| End bp | 717609 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379038 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | YP_002262162 |
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| Protein GI | 209694234 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCGAAT TTACTAACCG ATTACAGAAA GTCGCGTCTA ATCCCAAAGC CTTTAAAAAT
ACTGGCCGTG GTATTGAAAG AGAAACACTT CGTTTTACTC TTGATGCTGC ACTTTCTTCA
AAACCACATC CAGCAGGCGT AGGTTCAGCA CTCACTCACA AATACATCAC AACGGATTTT
GCTGAGTCAT TATTAGAATT TATTACGCCG GTATCTCATG ATGTTAAAAC GGTATTAAAG
CAATTAGAAG ATGTGCATCA TTACACGGTC TCTCATATGG GAGAGGAAAA ATTGTGGCCG
CTGTCTATGC CATGTTTTGT GAGCAAAGAC GATGACATTA CTTTAGCGCA GTATGGTAAA
TCTAATGTTG GTCAATTAAA AACGACTTAC CGTGAAGGTT TAAAGCGCCG TTATGGCAGT
GTGATGCAGG TCATTTCTGG TGTTCATTTT AACTTTTCTT TTTCGAATGA GTTTTGGGAC
GAATTACTGG GTGAGCAAAC TGAAAAAGAT CGTCAAGATT CGGTATCTGA TGCTTATTTT
GGGTTGATCC GTAATTACTA CCGCTTTGGG TGGTTGATCC CTTATTTCTT TGGTGCTTCT
CCTGCATTGT GTGGTTCTTT TATTCAAGGT CGAGAAACGA CAATGAATTT TGAATCACTA
GGTAAAACAT TGTATTTACC TTATGCAACA TCATTAAGAT TAAGCGATCT TGGTTATACA
AATGATGCTC AAAGTGATTT AAAAATCAGT TTAAATAGTA TCGATGAATA TATTGAAGGC
TTGAATAAAG CGATTCGCAC TCCATCGGAA GAGTTTGCAA AAATAGGTTT AAAAGAGGGG
GATAAACACA TCCAATTAAA TGCGAATGTG TTGCAGATTG AAAATGAATT GTATGCTCCA
ATTCGCCCTA AGCGTGTCGC TAAATCAGGT GAAAAGCCTT CAGAAGCATT AGAGCGTTCG
GGAATTGAAT ATATAGAAGT TCGATCTTTA GATGTAAACC CATTTAGCCC TATTGGTGTA
GATGAAGATC AAGTTCGATT CTTAGACCTT TTCTTAACAT GGTCTGTACT CACTGATTCT
GCTCCTATGG ATGACAGTGA AATGGCGTGT TGGAAAGACA ATTGGAATAA GATTGTTGAA
CTGGGACGTA AGCCTGGGTT AGAGCTTCAA ATTGGTTGCC AAGGGGAGCG TTTAACTCAG
AAAGCATGGG CTGAACGAGT TTTTGATGAT CTATTCACAA TAGCTAAAAA AATGGATGCA
GTTAATGGTG ATGATGCATA CCAACAAACT CATCAACGAC TAAGTGCGAT GATAGAGAAT
CCAGAGTTAA CTATTTCAGG TCGTCTACTT GCTGAAACGA AGAAGGCTGG TGGTATTGGT
ATTATTGGTT GTAAATTGGC AATACAACAT CGCCAAGCGC ATTTAGATCA TAAATACAGC
TTCTATACTA AAGATGAGTT GGATGCAGAG GTAGAGCGTT CTGTTCTGGC TCAGAAAGAA
ATTGAGGCCA GTGATACAAT GCCTTTTTCA GAGTATTTAG ATGATTATTT CAATTATTTG
AAATAA
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| Protein sequence | MTEFTNRLQK VASNPKAFKN TGRGIERETL RFTLDAALSS KPHPAGVGSA LTHKYITTDF
AESLLEFITP VSHDVKTVLK QLEDVHHYTV SHMGEEKLWP LSMPCFVSKD DDITLAQYGK
SNVGQLKTTY REGLKRRYGS VMQVISGVHF NFSFSNEFWD ELLGEQTEKD RQDSVSDAYF
GLIRNYYRFG WLIPYFFGAS PALCGSFIQG RETTMNFESL GKTLYLPYAT SLRLSDLGYT
NDAQSDLKIS LNSIDEYIEG LNKAIRTPSE EFAKIGLKEG DKHIQLNANV LQIENELYAP
IRPKRVAKSG EKPSEALERS GIEYIEVRSL DVNPFSPIGV DEDQVRFLDL FLTWSVLTDS
APMDDSEMAC WKDNWNKIVE LGRKPGLELQ IGCQGERLTQ KAWAERVFDD LFTIAKKMDA
VNGDDAYQQT HQRLSAMIEN PELTISGRLL AETKKAGGIG IIGCKLAIQH RQAHLDHKYS
FYTKDELDAE VERSVLAQKE IEASDTMPFS EYLDDYFNYL K
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