Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0641 |
Symbol | |
ID | 6986579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 712625 |
End bp | 713056 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643379036 |
Product | inner membrane protein |
Protein accession | YP_002262160 |
Protein GI | 209694232 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.346096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATT GGTTCAATGC AGATTCAGCA TTATGGGTAT TATTTAGTTC TGGGTTTTTA AGTGCCACTT TATTACCTGG GGCGTCAGAA GCCAGTTTAA TTGCTACGTT AAAATTAGAC AGTTTTTCAA TGTGGACAGT TATTACAGTC GCAACATTAG GAAATACTTT AGGAGGGATA ACAAATTATT GGCTTGGTTT GTTACTTCCT GATAAAACTT CTTCACAGAA ACACGGTCAT AAAGCCATAG AATGGATAAA GAAATACGGT TATTGGACGT TATTATTTAG TTGGTTACCC GTGATCGGCG ACCCTTTATG CTTGGCCGCT GGGTGGTTAA GAATGAAGTT TTTACCATGC GTGATTTTAA TTGGGATAGG AAAGGCTGCT CGATACGTAC TGTTGTCGCT TGCCGTGAAT GGGATTTTAT AG
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Protein sequence | MFDWFNADSA LWVLFSSGFL SATLLPGASE ASLIATLKLD SFSMWTVITV ATLGNTLGGI TNYWLGLLLP DKTSSQKHGH KAIEWIKKYG YWTLLFSWLP VIGDPLCLAA GWLRMKFLPC VILIGIGKAA RYVLLSLAVN GIL
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