| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0635 |
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| Symbol | alaS |
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| ID | 6989075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 703629 |
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| End bp | 706211 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379022 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002262154 |
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| Protein GI | 209694226 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.427199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATGA GCACTGACGA AGTCCGCCGT GCATTCCTTG CTTTTTTTGA AAGCAAAGGG
CACCAAATTG TTGAGAGTTC TTCTCTAGTT CCAGCGAATG ATCCAACTCT TTTATTTACG
AATGCGGGTA TGAACCAGTT TAAGGATTGT TTCCTTGGTT CTGAAAAGCG AAGCTATACT
CGTGCAACTA CCGCTCAGCG TTGTGTTCGT GCCGGTGGTA AACATAACGA TTTAGAAAAT
GTTGGTTTTA CTGCTCGCCA CCATACTTTC TTTGAAATGC TTGGTAACTT CAGCTTTGGT
GATTACTTTA AGCAAGATGC AATTAAGTAT GCATGGGAAT TCCTAACTGA GCGTTTAGAG
CTTCCTGCGG ATCGTCTGTT AGTGACAATC TACGAAACTG ATGATGAAGC GTTTGAGATC
TGGAATAAAG AAATGGGTAT TCCAGCTGAT CGTATCGTTC GTATTGGTGA TAACAAAGGC
GCACCTTATG CATCAGATAA CTTCTGGCAA ATGGGTGACA CGGGTCCTTG TGGTCCTTGT
ACTGAGATTT TTTACGATCA CGGTGAACAT ATTTGGGGTG GCCGTCCAGG TACGCCTGAA
GAAGATGGCG ACCGTTTCAT TGAAATCTGG AATAACGTTT TCATGCAATT CAATCGCCTA
GCTGATGGCA CAATGGAACC ACTTCCAAAA CCATCAGTAG ATACAGGGAT GGGTATTGAG
CGTATCGCTG CAATTATGCA AGGTGTACAT TCAAACTATG AAATTGATAT CTTCCAAACA
CTAATTAAAG AAACGGCAAA AGTTGTTGGT TATGATGATC TTTCAAACCA ATCTTTACGT
GTAGTTGCAG ACCACATCCG TTCTTGTTCT TATTTAATCG TTGATGGTGT TATGCCGTCA
AACGAAGGTC GTGGCTATGT ATTACGTCGT ATTATTCGTC GTGCAGTACG TCACGGTAAC
AAGTTAGGTG CTAAAGGTTC TTACTTTTAT AAGTTAGTTG GACCATTAGC TGAAATCATG
GGTACGGCTG GTGAAGAGCT TAAGAAGCAA CAAGCACTAG TAGAAAAAGT ACTTAAGATT
GAAGAAGAGA ACTTCGGCCG TACGCTTGAG CGTGGCATGG TTATCTTAAA CGAAGCGCTA
GATAATCTAG AAGGCACCGT TCTTGACGGT GAAACTGTAT TTAAACTTTA TGATACTTAC
GGTTTCCCTG CTGACTTAAC GAACGATGTT GCTCGTGAGC GTGAATTAAC TATCGATGAA
GATGGTTTTG AAAAAGCGAT GAACGAACAA CGCCAACGTG CTCGTGAAGC GGGTCAATTT
GGTACTGATT ATAATGCGGT TATCAAAGTT GAATCTGAAA CGGTATTCCA CGGTTATGAT
TTTACGGAAG CGAAAGCAAC CGTATTAGAA ATTTTCTGTG AAGGCGAAGC GGTTGAAACG
CTTTCTGCTG GCGATGATGC GATTCTAATC TTAGATGTAA CACCGTTCTA TGCTGAATCC
GGTGGTCAAT CTGGTGATGC GGGTATTATT ACCGTAGAAG CGGGTAAATT TGTTGTTACT
GATACTCAAA AAGTAGGTAA TGCGATTGGT CACCACGGTA AATTAGTGGA AGGTGTATTA
TCTACGGCTG ATAGAGCAAT GGCTCAAGTG GATGAAGAGC GTCGCACTGC GATTACTTTA
AACCACTCGG CAACCCATTT ATTACATGCA GCACTTCGTC AAGTACTGGG TGAGCATGTA
ACGCAAAAAG GGTCATTAGT TAAAGCCGAA AGTTTACGTT TTGACTTTTC TAACCTTGAA
GGGGTTAAAC CGGAAGAACT TCGACTTGTT GAGCGTATTG TTAACCAACA AGTACGTTTA
AATCATGCAA TTGAAACCGA CCTTATGGAC GTTGATGCGG CGAAAGAAAA AGGCGCAATG
GCTCTGTTTG GTGAGAAGTA TGATGATGAA GTTCGTGTAC TGTCAATGGG TGAGTTTTCA
ACTGAGCTAT GTGGTGGTAT TCACGCATCA AGTACGGGTG ATATAGGTCT GTTTAAAATC
ACGTCTGAAG GTGGCATCGC CGCAGGTATT CGTCGTATTG AAGCAGTAAC TGGTGAAGCA
GCATTAGATG CAATTGAATC TCAGCAGAAA CTAGCGGATA AAAAGCTTCA TGATGCGAGT
TCAAAAACGA AGTTACTTGA AAAAGAAATC CAACAATTGA AAGATAAATT GGCTTCTCAA
GCAAGTTCAG ACTTAATCAG TCAAGTACAA GACATATCAG GCGTTAAAGT GTTGATCACT
CAATTGGATG GTGCTGATAA TAAAGCCCTT CGTGGTATGG TTGATGAACT TAAAAACCAA
ATTGGCAGTG GTGTTATCAT GATTGGTAAT GTCAGTGATG ATAAAGTGGG TTTAATTGCG
GGTGTGACTA AAGATCTTAT TGGCCAAGTT AAAGCGGGCG AGTTAGTGAA TATGGTTGCA
CTGCAAGTGG GTGGTAAAGG CGGCGGCCGT CCTGATATGG CTCAAGCGGG CGGTACCGAT
GCAAAAGCAT TACCTGCAGC GTTAGCGACG GTTGAAGCTT GGTTAACTGA GCGTCTTTCA
TAG
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| Protein sequence | MYMSTDEVRR AFLAFFESKG HQIVESSSLV PANDPTLLFT NAGMNQFKDC FLGSEKRSYT
RATTAQRCVR AGGKHNDLEN VGFTARHHTF FEMLGNFSFG DYFKQDAIKY AWEFLTERLE
LPADRLLVTI YETDDEAFEI WNKEMGIPAD RIVRIGDNKG APYASDNFWQ MGDTGPCGPC
TEIFYDHGEH IWGGRPGTPE EDGDRFIEIW NNVFMQFNRL ADGTMEPLPK PSVDTGMGIE
RIAAIMQGVH SNYEIDIFQT LIKETAKVVG YDDLSNQSLR VVADHIRSCS YLIVDGVMPS
NEGRGYVLRR IIRRAVRHGN KLGAKGSYFY KLVGPLAEIM GTAGEELKKQ QALVEKVLKI
EEENFGRTLE RGMVILNEAL DNLEGTVLDG ETVFKLYDTY GFPADLTNDV ARERELTIDE
DGFEKAMNEQ RQRAREAGQF GTDYNAVIKV ESETVFHGYD FTEAKATVLE IFCEGEAVET
LSAGDDAILI LDVTPFYAES GGQSGDAGII TVEAGKFVVT DTQKVGNAIG HHGKLVEGVL
STADRAMAQV DEERRTAITL NHSATHLLHA ALRQVLGEHV TQKGSLVKAE SLRFDFSNLE
GVKPEELRLV ERIVNQQVRL NHAIETDLMD VDAAKEKGAM ALFGEKYDDE VRVLSMGEFS
TELCGGIHAS STGDIGLFKI TSEGGIAAGI RRIEAVTGEA ALDAIESQQK LADKKLHDAS
SKTKLLEKEI QQLKDKLASQ ASSDLISQVQ DISGVKVLIT QLDGADNKAL RGMVDELKNQ
IGSGVIMIGN VSDDKVGLIA GVTKDLIGQV KAGELVNMVA LQVGGKGGGR PDMAQAGGTD
AKALPAALAT VEAWLTERLS
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