| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0616 |
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| Symbol | |
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| ID | 6986569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 677973 |
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| End bp | 679256 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643379004 |
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| Product | putative sodium-dependent nucleoside transporter protein |
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| Protein accession | YP_002262136 |
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| Protein GI | 209694208 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.552208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGT TAATGAGCTT GGTTGGGATA GTAGCGCTGC TTGCATTTGC AGTACTAATA
TCTGATAACC GTAAAGCAAT CAATCTACGT ACTGTCGGTG GCGCTTTTGC CATTCAATTT
ATTCTAGGTG CATTCATACT ATACGTACCT GTGGGTCGTG ATGTACTGTT AGGTGCATCT
GAAGCGGTTG CGAATGTAAT CAACTACGGT AACACGGGTA TCGAATTCTT ATTCGGTGGC
TTAGTATCGA ATAAAATGTT TGAAGTATTT GGTGGTGGCG GTTTCGTATT CGCACTGCGT
GTACTTCCTG TAATCGTGTT CTTTGCATCA CTGACTGCGG TACTTTATTA CCTTGGTATC
ATGCAAGTTG TGATTAACTT CTTAGGTGGT GCTCTTCAAA AAGCACTGGG TACTTCTCGT
GCGGAATCTC TTTCTGCTAC AGCGAATATT TTCGTTGGTC AAACAGAAGC ACCTCTAGTT
GTTCGTCCAT TCATTCCAAA AATGACTCAA TCAGAATTGT TTGCCGTAAT GTGTGGTGGT
CTAGCTTCTG TTGCTGGTGG TGTTCTTGCT GGTTATGCGT CTATGGGCGT GCCTCTAGAG
TACCTAATCG CGGCGTCATT CATGGCAGCT CCTGGTGGTC TTCTATTTGC TAAAATTCTT
AAACCAGAAA CAGAAACACC GGTTGATCAA TTTGATGCAC TTGATAACAA AGGCGACGAC
AAACCAGCTA ACGTAATCGA TGCAGCAGCA GCAGGCGCTG CAACAGGTAT GCAACTTGCG
TTAAACGTAG GTGCAATGCT TCTTGCATTC ATCGGTCTAA TCGCTCTAAT CAACGGTATC
CTAGGTGGTG TTGGTGGTTG GTTCGGTATG CCAGAAATTA CGCTAGAACT TATTCTTGGT
TACGTATTCG CTCCAGTTGC TTTCCTAATC GGTGTGCCGT GGGAAGAAGC GACAGTTGCA
GGTTCGTTCT TAGGTCAAAA ATTGGTAGTT AACGAATTCG TTGCTTACTT AAACTTTGCA
CCTTACCTAA AAGACGTTGC TGATGGCGGC ATGTTAGTTG CACAAACTGG CGTTGAAATG
TCTGAGAAAA CGAAAGCAAT CATTTCATTC GCACTATGTG GTTTTGCTAA CCTTTCTTCT
GTAGCTATCC TACTTGGTGG TTTAGGTAGC CTTGCTCCTG AACGTCGTCA TGACATCGCT
AAAATGGGCA TGAAAGCTGT TGCTGCTGGT ACATTATCTA ACTTAATGTC AGCAACAATC
GCAGGTCTAT TCTTATCTAT CTAA
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| Protein sequence | MSLLMSLVGI VALLAFAVLI SDNRKAINLR TVGGAFAIQF ILGAFILYVP VGRDVLLGAS
EAVANVINYG NTGIEFLFGG LVSNKMFEVF GGGGFVFALR VLPVIVFFAS LTAVLYYLGI
MQVVINFLGG ALQKALGTSR AESLSATANI FVGQTEAPLV VRPFIPKMTQ SELFAVMCGG
LASVAGGVLA GYASMGVPLE YLIAASFMAA PGGLLFAKIL KPETETPVDQ FDALDNKGDD
KPANVIDAAA AGAATGMQLA LNVGAMLLAF IGLIALINGI LGGVGGWFGM PEITLELILG
YVFAPVAFLI GVPWEEATVA GSFLGQKLVV NEFVAYLNFA PYLKDVADGG MLVAQTGVEM
SEKTKAIISF ALCGFANLSS VAILLGGLGS LAPERRHDIA KMGMKAVAAG TLSNLMSATI
AGLFLSI
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