| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0600 |
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| Symbol | truB |
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| ID | 6989065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 663141 |
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| End bp | 664097 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378987 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002262120 |
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| Protein GI | 209694192 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGTC GTCGTAAGGG TCGTCCTATA GATGGTGTTA TCTTAATTGA TAAACCGGCA
GGAATTACGT CGAACGATAC ATTGCAAAAA GTAAAACGCA TCTACTTTGC AGAGAAAGCG
GGCCATACTG GTGCGCTTGA TCCTCTTGCT ACCGGTATGC TGCCTCTTTG TTTTGGTGAA
GCGACGAAGT TTTCTCAGTT CTTATTGGAT TCAGACAAGC GTTATCGTGT GGTTGCTAAA
TTAGGTGAAC GCACAAATAC ATCTGACTCT GATGGTGAAG TGGTTGAAAC TCGTGAAGTA
AAAGTTGACC GTGGTCAGCT TGAACGTTGC ATTGCCAAGT TTCGTGGAAC AACCGATCAA
ATTCCATCAA TGTTTTCTGC GTTAAAACAT GAAGGTCGCC CTTTGTATGA ATACGCACGT
GAAGGCATTG AAGTTCCTCG TAAGTCTCGA AAAATTACGG TTTATTCAAT TGAATTAATC
CGTTTTGAAG GTCATGAAGT TGAAATGGAA GTGCATTGTT CAAAAGGCAC TTACATTCGA
ACAATAACGG ATGATCTTGG CGAAATGTTG GGTTGTGGTG CTCACGTAAC GTATTTACGC
CGCACTGGGG TGTCAAATTA CCCATATGAA AATATGGTGA CGATTGAACA CCTTGAAGCA
TTATTAGAGA AAGCACATCG TGAAGAGATT TCACCTCGTG AATTACTTGA TCCTCTATTA
ATGCCTATGG ATTCCGCGGT ACAAGATTTA CCTGAAGTAA ATATGATCAC AGAATTAGCC
GATCATGTTT TACATGGTCA GCCAGTTCAA GTATTTGGCG CTCCACAAGA TGGCATTGTT
CGCATGACAT CTGGTGAAGA ACGTTTATTT ATTGGTATTG GTCATATTGA TGATGATGGT
CGAGTTGCAC CAAAGCGTTT AGTTGTATTT AGAGATGAAA TCGAAGAAGA CAAATAA
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| Protein sequence | MARRRKGRPI DGVILIDKPA GITSNDTLQK VKRIYFAEKA GHTGALDPLA TGMLPLCFGE
ATKFSQFLLD SDKRYRVVAK LGERTNTSDS DGEVVETREV KVDRGQLERC IAKFRGTTDQ
IPSMFSALKH EGRPLYEYAR EGIEVPRKSR KITVYSIELI RFEGHEVEME VHCSKGTYIR
TITDDLGEML GCGAHVTYLR RTGVSNYPYE NMVTIEHLEA LLEKAHREEI SPRELLDPLL
MPMDSAVQDL PEVNMITELA DHVLHGQPVQ VFGAPQDGIV RMTSGEERLF IGIGHIDDDG
RVAPKRLVVF RDEIEEDK
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