| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0570 |
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| Symbol | ptsP |
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| ID | 6988924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 626228 |
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| End bp | 628489 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378955 |
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| Product | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain |
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| Protein accession | YP_002262090 |
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| Protein GI | 209694162 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00603169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTACTC AACTCAGGGA TATTGTTGAC CAAGTCGCTA AAGCGGAATC ACTGGATGAT
GCTTTAGCGT TATTGGTTAA AAGTACGCGC CATTCAATGC GCACTGAATG TTGCTCAGTT
TATCTTATGA GTAATGACAG CCTGCGCTTA GAATTAATGG CAACAGAAGG CCTGAAGGCC
AAACCTAACA CGGTTTCCTT AAGTATTGAT GAAGGCCTTG TGGGTTTAGT TGCGCGCAGC
TGTGAGCCTC TTAACTTAGC AAATGCCTCT GTTCACCCCT CATACAAATA CATACCTAGT
ATTGCTGAAT ATAAATTTAA TTCTTTTTTG GCGACACCGA TTATTTATCG ACGTCAAAAT
CTTGGGGTTC TGGTTGTTCA GCAAAAAGAA AAACGTCAAT TCACCGAAGT AGAAGAATCC
TTTATTGTGA CTCTGTCGGC GCAATTGGCT GTGGTTCTTG CTCACGCTAA AGCACAAGAG
AGCTGGTCAA GCCAACTTCA ACTAACGTCT GTTAATCAAA AGCAATTTAA AGGATTGTCA
GCATCGACTG GAGTGGCTAT CGCCCCTTTG TGGTTTGATG ATGCTCAACC TAACGTTGAA
GCGGTTTTAC CGAGTTCTTG TATTGATATA GAAAAAGAAC AAGATCGACT TGGTAGTGCT
ATTGAGTTTG CATTAAAAGA TTTTCGTCGA GCAAAAAAGA GATTTGAACA AGAGTTAAAT
ACAGAAACCT TAGCTATTTT TGATCTGTTT ACCCACTTAT TGAATGATCC GATGTTGAAG
GGGGATCTTA AAAAACAGAT CAACCAAGGA GATTCTGCTG AGTGGGCATT ACGTCAGGTT
ATTGAGTCTT ATGCCGCGCG TTTTGGACGC ATGAGCGACT CTTATTTAAG TGAAAGAGCG
AATGATGTTC GAGAATTAGG GCAGCGTTTA CTTTATTTCT TAAATTATGA GAATAAATTT
GATCTCGAAC TCTCGGAACC AGTCATCTTA GTAACGACCC AGCTAACAGC GTCGATGCTT
GCCAGTATTC CTAGAGAAAA ATTAAAGGCG GTTATCTCAT TAGAAGGCGC GGCGAACTCT
CACGCGGCAA TTCTATCAAG AGCGCTTGGT ATTCCTGCGA TCATGGGGGT TGAGTTTAAT
CCTGCGCATT ATCATCAAAA GCTTGCCATC GTTGATGGCT ATAGTGGCAT GCTATACATA
AAGCCGACAG AGGCTTTAGT TCAAGAATAT ATTGAACTGC AAAATGAAGA ATTAGCCTTA
TCTCAGCTTA TTACTCTGGA TTTAGATAAG CCCACCTTTA CTCGTGATGC CCATCAAATG
AGAATACATT TGAATGCAGG TCTCAGCGCC GACACCACGA TTGCTGTAAA CCAAGGTGTT
GATGGTGTTG GTCTTTATCG AACGGAAATC CCGTTTCTTT TACAGCAGCG CTTTCCTTCT
GAAGAAGAGC AATATCTTCA ATATAAATCG ATTTTAGAAA CCTATATTGA TAAACCCGTC
ATCATGAGAA CATTAGATAT TGGCGGGGAT AAACCATTAC CTTATTTACC AATAGAAGAA
GACAACCCAT TTTTAGGTTG GCGCGGGATC CGTTTTACTT TGGATCATCC TGATATTTTC
TTATTACAGT TAAAAGCAAT GGTAAGAGCG AATATCGGTA ATAATAATCT TTCTATCATG
TTACCGATGA TTTCTGGTAT TCCAGAGCTA AAACAATCAA GAAAGTTGAT CAATCAAGCT
TATGAAGAAG TATTGAATGA ATCGGGTGTT TCTTTTGTTC TACCTCGGAT TGGTATGATG
ATCGAAGTGC CGTCTATGTT GTATTTACTC CCAAGAATTA CTGAGTTGGT GGATTTTATT
TCTGTCGGGA CAAATGATTT AACACAATAT TTACTCGCGG TTGATCGTAA TAATTCAAGA
GTTTCTCATG TGTATGAGTC ATATCATCCT GCGGTGCTAT TGGCTTTAAA GCAGATTATC
GATACGGCTC AGCAATATAA TTTACCGGTG AGTGTGTGTG GTGAGTTGGC TGGCGATCCT
ATTGGCTGTT TATTGTTGAT GGGATTAGGT TACGAACATC TCAGCATGAA TACCTCTAAC
GTGGCCAAAG TAAAATACAT AATTCGTAAA GTTACATTAG AAGAAGTAAA AGAGATTGTT
GAAAAACTTT TACACCATGA TGATGCAGAG AGTATTTTGG CTGATATGAT GGTCTTTTTT
GAAAAGCATG ATCTTTCAGG ATTCATCAGA GCAGGAAAAT AA
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| Protein sequence | MLTQLRDIVD QVAKAESLDD ALALLVKSTR HSMRTECCSV YLMSNDSLRL ELMATEGLKA
KPNTVSLSID EGLVGLVARS CEPLNLANAS VHPSYKYIPS IAEYKFNSFL ATPIIYRRQN
LGVLVVQQKE KRQFTEVEES FIVTLSAQLA VVLAHAKAQE SWSSQLQLTS VNQKQFKGLS
ASTGVAIAPL WFDDAQPNVE AVLPSSCIDI EKEQDRLGSA IEFALKDFRR AKKRFEQELN
TETLAIFDLF THLLNDPMLK GDLKKQINQG DSAEWALRQV IESYAARFGR MSDSYLSERA
NDVRELGQRL LYFLNYENKF DLELSEPVIL VTTQLTASML ASIPREKLKA VISLEGAANS
HAAILSRALG IPAIMGVEFN PAHYHQKLAI VDGYSGMLYI KPTEALVQEY IELQNEELAL
SQLITLDLDK PTFTRDAHQM RIHLNAGLSA DTTIAVNQGV DGVGLYRTEI PFLLQQRFPS
EEEQYLQYKS ILETYIDKPV IMRTLDIGGD KPLPYLPIEE DNPFLGWRGI RFTLDHPDIF
LLQLKAMVRA NIGNNNLSIM LPMISGIPEL KQSRKLINQA YEEVLNESGV SFVLPRIGMM
IEVPSMLYLL PRITELVDFI SVGTNDLTQY LLAVDRNNSR VSHVYESYHP AVLLALKQII
DTAQQYNLPV SVCGELAGDP IGCLLLMGLG YEHLSMNTSN VAKVKYIIRK VTLEEVKEIV
EKLLHHDDAE SILADMMVFF EKHDLSGFIR AGK
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