Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0569 |
Symbol | nudH |
ID | 6988866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 625679 |
End bp | 626191 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643378954 |
Product | dinucleoside polyphosphate hydrolase |
Protein accession | YP_002262089 |
Protein GI | 209694161 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0412118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAGATG GCGATGGTTT CCGCCCGAAT GTCGGGATAG TGATATGCAA TAGCCATGGT CAAGTATTCT GGGCGAAGCG ATATGGACAG CATTCATGGC AGTTTCCGCA AGGTGGTATT GATGACGGTG AAACTCCAGA GCAAGCCATG TATCGTGAAT TGTATGAAGA AGTCGGTCTA ACTAAGAATG ATGTACGTAT TTTAGCAAGT AGCCGTCATT GGTTACGCTA TAAACTGCCA AAACGTTTAG TTAGATGGGA TTCAAAGCCT GTTTGTATTG GACAGAAACA GAAATGGTTT TTGTTACGCT TAGAATGTGA TGAATCTAAG GTGAACATGC AAAGAGATCG CTCACCTGAG TTTGATGGTT GGCGATGGGT AAGTTATTGG TACCCAGTAA GACAAGTTGT ATCATTTAAG CGAGATGTTT ATCGTCGAGC TCTTAAAGAG TTTGCGGCAA TTGCAATGCC GTTTAAAGAA CGAAAATTTA AAAGGAAAGG TAAAAAAGGG TAA
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Protein sequence | MIDGDGFRPN VGIVICNSHG QVFWAKRYGQ HSWQFPQGGI DDGETPEQAM YRELYEEVGL TKNDVRILAS SRHWLRYKLP KRLVRWDSKP VCIGQKQKWF LLRLECDESK VNMQRDRSPE FDGWRWVSYW YPVRQVVSFK RDVYRRALKE FAAIAMPFKE RKFKRKGKKG
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