Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0564 |
Symbol | recJ |
ID | 6988425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 617993 |
End bp | 619732 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643378950 |
Product | ssDNA exonuclease RecJ |
Protein accession | YP_002262085 |
Protein GI | 209694157 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.755584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAG TGAAACGTCG TATTATTCCT GTTATTCCAA ACTTTCCGAG TTCAATTCCT TCAATCTTAC AACGGATTTA TGCGACTCGT GGGATCACAT CTAATAATCA GTTAGAACGC GGTGCTAAGC ATTTACTGTC ATTTCAGTCA ATGCATGGTA TTGAAAAAGC GGTAGATATT TTAGTTGAAG CGATAGCAAA ACAAACACGA ATTATTGTTG TGGGTGACTT TGATGTTGAT GGAGCGACGA GCTCTGCACT GTCAGTCATG GCATTTCGAA TGATGGGCAG CAATAATGTG GATTACTTAG TCCCTAACCG TTTCGAAGAT GGGTACGGAT TAAGTCCTGA TGTGGTTGAT CAAGCCAAAG CAATGGGGGC TGAGATCATT ATGACCGTTG ATAATGGCGT ATCATCTATT GATGGTGTCG CTGCTGCTAA AGCTTATGGT ATGCAAGTGG TGGTGACGGA TCATCATTTA CCGGGGTCAT CATTACCAAT TGCAGATTCG ATTGTGAATC CAAACCTTGA AGAGTGTGCC TTTCCTTCTA AATCGTTAGC TGGCGTAGGG GTTGCTTTTT ATTTGATGTT GGCTATCCGT GCGCGTTTAC GTGAAAACAA CTGGTTTGAA ACGCAAAATA TTCCTATCCC TAACCTTGCT GACTTATTGG ATTTAGTCGC TTTAGGTACC GTTGCTGATT TAGTGGCTTT GGATGAAAAT AACCGTATTT TAGTGCATCA AGGTATTCAA CGAATTCGAG CTGGGAAATG CCGTCCAGGA ATTCAAGCGT TGATCGAAGT TGCCAATAAA GTGCCATCTA GGATCAATGC TTCAGACTTT GGTTTTGCGT TAGGCCCTAG AATTAATGCG GCAGGGCGTT TGGATGATAT GTCATTTGGC GTAGAACTTT TGATGTCCAA CAACATTCAT GCTGCTCGTC GTATGGCGTC AGAATTAGAT GCTTTGAATC AAACTCGTAA AGAAATAGAA CAAGGCATGA AAGAAGAAGC GATGGCAATC TGTGAGCGCT TAGAGTTTGG CGCACAAAGT GAATTGCCAT TTGGTTTAGT TTTATTTCAA CGAGATTGGC ACCAAGGTGT GATTGGTATT TTAGCATCTC GTCTCAAAGA GAAATACCAT CGTCCAGTGA TTGCTTTTGC TGATGGTGGT GATGGGTTAA TTAAAGGATC ATGCCGTTCA ATCTCGGGTT TTCATATGCG TGATGCGTTG GATTTAATTG ATACCCGAAA CCCCGGTTTA ATCTTAAAAT TTGGTGGTCA TGCGATGGCT GCGGGATTAA GTATTAAAGA AGTCGATTAC AAGCGTTTCT CCCAAGCGTT TGATGACGTG GTCCGTGAAT CAGTAGAAGA AGAAGCGTTA ACTGGGGTGG TATTATCTGA TGGCGAATTA ATGCCAGAAG AATTTACGTT AGGTACCGCT GAGATCCTTC GTGCTGGTGG TCCTTGGGGA CAAGCTTTCC CTGAACCTAT TTTTGATGGT GAATTTAAAG TACTTAATCA ACGTTTAGTC GGTGAAAAGC ACTTAAAATT AATGTTAGAA CCAATACATA AAGATTTTCC AACCAACAAA ATGATCGATG CCATTGCCTT TAATATTGAC GTACGTCGTT GGCCAGATGC TTCAGTACAA AAAGTGAAGT TAGCTTACCG TTTAGACATT AATGAATTCA GAGGCAATCA GACATTACAG TTAATGGTTG ACTATATAGA ACCAATATAG
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Protein sequence | MIEVKRRIIP VIPNFPSSIP SILQRIYATR GITSNNQLER GAKHLLSFQS MHGIEKAVDI LVEAIAKQTR IIVVGDFDVD GATSSALSVM AFRMMGSNNV DYLVPNRFED GYGLSPDVVD QAKAMGAEII MTVDNGVSSI DGVAAAKAYG MQVVVTDHHL PGSSLPIADS IVNPNLEECA FPSKSLAGVG VAFYLMLAIR ARLRENNWFE TQNIPIPNLA DLLDLVALGT VADLVALDEN NRILVHQGIQ RIRAGKCRPG IQALIEVANK VPSRINASDF GFALGPRINA AGRLDDMSFG VELLMSNNIH AARRMASELD ALNQTRKEIE QGMKEEAMAI CERLEFGAQS ELPFGLVLFQ RDWHQGVIGI LASRLKEKYH RPVIAFADGG DGLIKGSCRS ISGFHMRDAL DLIDTRNPGL ILKFGGHAMA AGLSIKEVDY KRFSQAFDDV VRESVEEEAL TGVVLSDGEL MPEEFTLGTA EILRAGGPWG QAFPEPIFDG EFKVLNQRLV GEKHLKLMLE PIHKDFPTNK MIDAIAFNID VRRWPDASVQ KVKLAYRLDI NEFRGNQTLQ LMVDYIEPI
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