Gene VSAL_I0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0550 
Symbol 
ID6986549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp602822 
End bp603535 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content40% 
IMG OID643378936 
Productendonuclease I precursor 
Protein accessionYP_002262071 
Protein GI209694143 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACTTTA TGAAATTAAT TCGCTTAGTT ATCAGTCTTA TTGCTGTCAG TTTCACTGTT 
AACGTAATGG CAGCACCTCC TTCTTCTTTC TCAAAAGCAA AAAAAGAAGC CGTCAAAATC
TATCTTGATT ACCCAACCTC CTTTTATTGT GGCTGTGACA TTACGTGGAA AAATAAAAAG
AAAGGGATCC CTGAATTAGA AAGCTGCGGA TACCAAGTCC GTAAACAAGA AAAACGAGCC
AGTCGTATTG AATGGGAGCA TGTTGTTCCA GCATGGCAAT TTGGTCATCA ACGTCAATGT
TGGCAAAAAG GTGGGCGTAA AAATTGCACT AGAAACGACA AGCAATTCAA ATCAATGGAA
GCCGACTTAC ATAATCTAGT GCCTGCGATT GGTGAAGTAA ACGGGGACAG ATCCAACTTC
CGATTCTCAC AATGGAATGG AAGCAAAGGC GCTTTCTATG GCCAATGTGC TTTTAAAGTC
GACTTCAAAG GCCGTGTTGC CGAGCCACCA GCACAATCTC GTGGTGCCAT TGCCCGAACG
TATCTTTATA TGAACAACGA ATATAAATTT AACTTATCAA AAGCACAGCG ACAACTTATG
GAAGCATGGA ACAAACAGTA TCCAGTATCA ACTTGGGAAT GTACTCGTGA TGAACGTATA
GCAAAAATCC AAGGCAATCA TAATCAATTT GTTTATAAAG CATGCACTAA ATAA
 
Protein sequence
MYFMKLIRLV ISLIAVSFTV NVMAAPPSSF SKAKKEAVKI YLDYPTSFYC GCDITWKNKK 
KGIPELESCG YQVRKQEKRA SRIEWEHVVP AWQFGHQRQC WQKGGRKNCT RNDKQFKSME
ADLHNLVPAI GEVNGDRSNF RFSQWNGSKG AFYGQCAFKV DFKGRVAEPP AQSRGAIART
YLYMNNEYKF NLSKAQRQLM EAWNKQYPVS TWECTRDERI AKIQGNHNQF VYKACTK