| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0542 |
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| Symbol | proC |
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| ID | 6986546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 596137 |
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| End bp | 596955 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643378928 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_002262063 |
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| Protein GI | 209694135 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0647728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACATC GTAACATTGC TTTTATTGGT GCGGGAAACA TGACTCGTTC AATCATTGCA
GGCTTAATTA GCAGTGGTTA TCCAAAAAAA AATATCACCG CAACAAACCC AAGCACTGAC
AAACTAAACA ATTTAGAGCA ATGCTATGGT ATTAACATCA GTACCGATAA CCTTGCCGCA
GCTCAACAGG CTGACGTTAT TGTTCTTGCT GTAAAACCAC AAATGATGGA GACCGCAGCA
AAGCCACTCC AATCCGTGGA TTACTCTGAT AAACTGGTTA TTTCGATTGC TGCTGGTATT
TCAGCTAAAC GCTTAAATGA AATGTTCGCT GCCGAATTAA ATTTGGTTCG AGTCATGCCG
AATACGCCAG CATTAGTCGG TAAAGGCATG AGTGGCCTAT TTGCCGTTGA GCATATTTCC
GAACAAGACA AACATTTTGC AAGTGATTTA CTTTCAGCCG TGGGGGAAGT CTGCTGGGTT
GAAAAAGAAT CTGGTATTAA TTCTGTCATT GCAGCAGCAG GAAGCGCACC TGCGTATTTC
TTCTTATTTA TGGAAGCAAT GCAGGCCGAA GCCATTAAAC AGGGCTTTAG TGAGGATACC
GCTCGTCTGT TAGTGCAACA ATCCGCACTC GGTGCCGCCG AAATGGTCAT AGCAAATCCT
GAAACACCAT TATCAACACT GCGTGAACAA GTGACCTCAA AAGGTGGGAC TACTGCTGAA
GCACTTCGCA CGTTTAATGA ACATCATCTG CAAGAGATCG TCGCTAAAGC AATGCAAGCG
GCCGTAGCTC GTGCAGAAGA AATGGAAACG TTGTTTTAA
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| Protein sequence | MEHRNIAFIG AGNMTRSIIA GLISSGYPKK NITATNPSTD KLNNLEQCYG INISTDNLAA
AQQADVIVLA VKPQMMETAA KPLQSVDYSD KLVISIAAGI SAKRLNEMFA AELNLVRVMP
NTPALVGKGM SGLFAVEHIS EQDKHFASDL LSAVGEVCWV EKESGINSVI AAAGSAPAYF
FLFMEAMQAE AIKQGFSEDT ARLLVQQSAL GAAEMVIANP ETPLSTLREQ VTSKGGTTAE
ALRTFNEHHL QEIVAKAMQA AVARAEEMET LF
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