Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0458 |
Symbol | |
ID | 6986510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 514317 |
End bp | 514898 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643378841 |
Product | polysaccharide biosynthesis/export protein |
Protein accession | YP_002261984 |
Protein GI | 209694056 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCT TCTTTATATC TTTTTGCTTA TTCATCTCTG TGCTCTCTCA CGCTTATGCA TCAGAGACTT CACCAGTAAA GAATACAGAA ATACAAAAAT CAGACACCAC GATTCAGAAA GATGATCTAG GTTATGTATT AGGGGCTGGT GATAGTATTC AGATATCGGT ATTTAAAGAG CCCGATATGA CCTTACGTTT GAAAATTCAC CGCGGTGGAT TTGTTAATTT CCCTTACCTT GGTGATGTGC AGTTATTGGG AAGAACTCCA GCACAAATAG AAAAAGACAT AGAAACTAAA TTGGCTGACG GGTACATCGT CCAGCCAATG GTAACCGTCA GTATTGAGTC CTTTAGAAAG TTCTTTATCA GTGGTGAAGT TGCAAACCCT AATGGGTACG AATTTCAACC AGGATTAACC GTTGAACAAG CGATTGCGAT GGCTGGTGGT TTTACTGATC GGTCAGATAG AGATGGCATT AACGTCCGTC TAGCCGCTAC AAATGAATTA ATTGAAGATG TGGGTCCAAC CTATCCAGTA GGTCCGGGCG ATGTAGTTAT TATTGAACAG AGTTTTTTCT AA
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Protein sequence | MKSFFISFCL FISVLSHAYA SETSPVKNTE IQKSDTTIQK DDLGYVLGAG DSIQISVFKE PDMTLRLKIH RGGFVNFPYL GDVQLLGRTP AQIEKDIETK LADGYIVQPM VTVSIESFRK FFISGEVANP NGYEFQPGLT VEQAIAMAGG FTDRSDRDGI NVRLAATNEL IEDVGPTYPV GPGDVVIIEQ SFF
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