Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0400 |
Symbol | |
ID | 6988431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 438149 |
End bp | 438847 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643378776 |
Product | hypothetical protein |
Protein accession | YP_002261929 |
Protein GI | 209694001 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.458276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAT TATCCCTCAC CACTGTTGTT GCTTCTGTTG TCTTAGTATT GGCAGTACCT GCACATTCAG CAGAGAAGGA GTTTACGACT AAAATTGCTA TTGATGCGTG GTTCCCTGAT GGAAAGGTTG GCTCTAAAGA TAATGCCGTT CGTGATAATG ATGTTGATGC ATCACAAGCG TTTTCTATTG CATTTGAACA TCCATACCCA ATTTTACCAA ATGTAAAAGT ACGTTATACC CCTGTGAAAG CAGATCGTTT TGAATATGAT CAAATCGATT ATACGGGTTA CTATAAATTA TTAGACACTA ACGGTCTTCA GTTTGATGTA GGTTTGACCT TAACGCAGTT TGCCAATGGT GAATTCAATA AAGGTGGCTC TGTTGATTCA ACGCAACCAC ACGATCAAAG CTTTAGTGAA ACGGCGATGA ACATGTACGC GGATGCGTCA CTGCATATTC CAAATACAAA CTTCCATATT TTTGGTCAGT ATGATTTTGG TAGCAGCAGC GATACTCGAA CAATGGATGG TCAAGCAGGG GTTAAGTACA TTCTTCCTGT TGATGAAACC GTTGATGTTG AATTCAAGCT GGGTTATCGA GTTATGGATC ATGAGTTTGG TTACTTTGAA GGTTTTGATA GCGACCAAGC AAACGTCATG GTAGATGGCT GGTTCGGCGG TTTGTCATTT GATTTCTAA
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Protein sequence | MNKLSLTTVV ASVVLVLAVP AHSAEKEFTT KIAIDAWFPD GKVGSKDNAV RDNDVDASQA FSIAFEHPYP ILPNVKVRYT PVKADRFEYD QIDYTGYYKL LDTNGLQFDV GLTLTQFANG EFNKGGSVDS TQPHDQSFSE TAMNMYADAS LHIPNTNFHI FGQYDFGSSS DTRTMDGQAG VKYILPVDET VDVEFKLGYR VMDHEFGYFE GFDSDQANVM VDGWFGGLSF DF
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