| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0359 |
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| Symbol | mdh |
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| ID | 6988256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 394789 |
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| End bp | 395724 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378737 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_002261890 |
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| Protein GI | 209693962 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000905728 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG CTGTTATTGG CGCCGCTGGA GGCATCGGAC AAGCATTAGC ATTACTTCTT
AAGAATCGAT TACCAGCCGG CTCGGATCTT GCTCTTTATG ATATTGCACC GGTAACCCCT
GGGGTTGCTG CGGATCTTAG TCATATCCCA ACACCAGTTT CAATTAAAGG GTATTGCGGA
GAAGATCCAA CACCAGCACT TGAAGGCGCT GATGTTGTTT TAATTTCTGC TGGTGTTGCT
CGTAAACCAG GAATGGATCG TTCAGATCTT TTCAATATTA ATGCGGGTAT TGTTAAGTCA
TTGGCTGAAA AAATTGCAGT GACTTGTCCA AAGGCATGCA TTGGTATTAT TACTAACCCT
GTTAATACAA CCGTGGCAAT TGCTGCTGAA GTATTAAAAA AAGCAGGTGT ATACGATAAA
AATAAATTGT TTGGCGTAAC CACACTGGAT GTGATCCGTT CAGAGACGTT TGTGGCTGAG
TTAAAAGGTA AAAATCCAGG AGAGATCTGT GTTCCTGTTA TTGGTGGGCA TTCTGGTGTT
ACGATTCTTC CTCTGCTTTC ACAAGTTGAG GGTGTTGAGT TCACCGCTGA AGAAGTGGCA
GCATTAACAC CGCGTATTCA AAACGCAGGA ACGGAAGTTG TGGAAGCTAA AGCTGGTGGC
GGTTCTGCGA CACTTTCAAT GGGCCAAGCG GCATGTCGCT TTGGTTTATC ACTAGTAAAA
GCGCTTAGTG GTGAGAAAGG GGTTGTAGAA TGTGCGTATG TTGAAGGCAA TGGTGAACAC
GCTCGTTTCT TCGCGCAACC CATTCTTCTT GGTAAAAATG GTGTTGAAGA GATTCAACAC
TATGGCGAAT TAAGTACTTT TGAACAAGAT GCACTAGATA GCATGCTAGA TACGTTAAAA
GCGGATATTA AAATTGGCGA AGAATTTATT AAGTAA
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| Protein sequence | MKVAVIGAAG GIGQALALLL KNRLPAGSDL ALYDIAPVTP GVAADLSHIP TPVSIKGYCG
EDPTPALEGA DVVLISAGVA RKPGMDRSDL FNINAGIVKS LAEKIAVTCP KACIGIITNP
VNTTVAIAAE VLKKAGVYDK NKLFGVTTLD VIRSETFVAE LKGKNPGEIC VPVIGGHSGV
TILPLLSQVE GVEFTAEEVA ALTPRIQNAG TEVVEAKAGG GSATLSMGQA ACRFGLSLVK
ALSGEKGVVE CAYVEGNGEH ARFFAQPILL GKNGVEEIQH YGELSTFEQD ALDSMLDTLK
ADIKIGEEFI K
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