| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0353 |
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| Symbol | rluA |
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| ID | 6989063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 387207 |
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| End bp | 387941 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378732 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_002261885 |
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| Protein GI | 209693957 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATGC TTGAGTATAA TCCACCAATG GAACCGCTTG ATATTGTCTA TCAAGATGAA
GCGATTCTTG CGGTGAATAA ACCGGCGGGG TTACTGTCTA ACCCTGGCCG AGCACCGGAG
CACTATGACA GTGTTTGGTC GCGTGTTGTT GCTGAGTTTC CTGATGCTCA ACTTGTACAT
CGTTTGGATA TGTCGACATC GGGGCTAATG ATATTTGCGC TTTATAAAGA AGCAGAAAGA
CACATTAAAA AGCAGTTTCA ATATCGGTTA ACTCATAAAG TGTATTATGC ACGAGTATGG
GGGAATGTTG AGAAGGTTGA AGGGCAGATT GATTTACCCT TGATTTGTGA TTGGCCAAAT
CGACCACGAC AGAAAGTCTG CTATGAACAC GGAAAATCGT CACAAACGGG TTATGAAGTG
ATTCAAGTTG AAGAGAAAAC GACATTGGTT CGTTTACTTC CTATTACAGG ACGCTCTCAT
CAACTACGAG TGCATATGAT GGAAGAAGGG CATGAGATTG TTGGCGATGA GTTTTACGCG
TCTAAAGAGG CTCTAGCGTT CTCTGACCGA TTACAATTAC ACTCTGCCGA GCTGAGTTTT
TATCATCCAG AAACCGATAA ATTCATCAGT TTATTTGCTC CTTGTGCGTT TTATCCAGAA
GCACAAGCCG GTGTTCTAGA TGCCATGGAT ATTGCTCCAG TAAGACCGGA TTACAAAACA
CTGCCTAAGC AATAG
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| Protein sequence | MAMLEYNPPM EPLDIVYQDE AILAVNKPAG LLSNPGRAPE HYDSVWSRVV AEFPDAQLVH
RLDMSTSGLM IFALYKEAER HIKKQFQYRL THKVYYARVW GNVEKVEGQI DLPLICDWPN
RPRQKVCYEH GKSSQTGYEV IQVEEKTTLV RLLPITGRSH QLRVHMMEEG HEIVGDEFYA
SKEALAFSDR LQLHSAELSF YHPETDKFIS LFAPCAFYPE AQAGVLDAMD IAPVRPDYKT
LPKQ
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