Gene VSAL_I0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0341 
SymbolrpsM 
ID6988092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp374362 
End bp374718 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content47% 
IMG OID643378719 
Product30S ribosomal protein S13 
Protein accessionYP_002261873 
Protein GI209693945 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000179312 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCGTA TAGCAGGCAT TAACATTCCT GATCATAAAC ACGCTGTAAT TGCACTTACT 
GCAATCTACG GCATCGGTAA GACCCGCTCG CAAGCTATTT TAGCTGCAGT TGGTATTGCT
GAAGATGTTA AGATCAGTGA ACTGAATGAT GAGCAGATTG ATATTCTGCG TGATGGTGTT
GCCAAATACA CTGTAGAAGG CGACTTACGT CGTGAAGTAT CGATGAACAT CAAGCGTCTT
ATGGACCTTG GCTGTTATCG TGGTCTTCGT CACCGTCGCA GTCTACCGTT GCGTGGACAG
CGTACTAAAA CCAACGCACG TACCCGTAAA GGTCCGCGCA AGCCGATCAA AAAATAA
 
Protein sequence
MARIAGINIP DHKHAVIALT AIYGIGKTRS QAILAAVGIA EDVKISELND EQIDILRDGV 
AKYTVEGDLR REVSMNIKRL MDLGCYRGLR HRRSLPLRGQ RTKTNARTRK GPRKPIKK