Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0341 |
Symbol | rpsM |
ID | 6988092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 374362 |
End bp | 374718 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643378719 |
Product | 30S ribosomal protein S13 |
Protein accession | YP_002261873 |
Protein GI | 209693945 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0099] Ribosomal protein S13 |
TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000179312 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCCGTA TAGCAGGCAT TAACATTCCT GATCATAAAC ACGCTGTAAT TGCACTTACT GCAATCTACG GCATCGGTAA GACCCGCTCG CAAGCTATTT TAGCTGCAGT TGGTATTGCT GAAGATGTTA AGATCAGTGA ACTGAATGAT GAGCAGATTG ATATTCTGCG TGATGGTGTT GCCAAATACA CTGTAGAAGG CGACTTACGT CGTGAAGTAT CGATGAACAT CAAGCGTCTT ATGGACCTTG GCTGTTATCG TGGTCTTCGT CACCGTCGCA GTCTACCGTT GCGTGGACAG CGTACTAAAA CCAACGCACG TACCCGTAAA GGTCCGCGCA AGCCGATCAA AAAATAA
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Protein sequence | MARIAGINIP DHKHAVIALT AIYGIGKTRS QAILAAVGIA EDVKISELND EQIDILRDGV AKYTVEGDLR REVSMNIKRL MDLGCYRGLR HRRSLPLRGQ RTKTNARTRK GPRKPIKK
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