| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0334 |
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| Symbol | rpsH |
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| ID | 6989201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 370277 |
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| End bp | 370669 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643378711 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_002261866 |
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| Protein GI | 209693938 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000236228 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCGAT TTCGGATATG CTGACCCGCG TTCGCAACGG TCAATCAGCA
AATAAAGTTG CTGTTAAAAT GCCTTCTTCA AAGCTTAAAG TTGCAATTGC TGCACTACTT
AAAGCTGAAG GCTACATCGC TGATTTCGCT GTTGAAGGCG ACATCAAACC TGAGCTAGAA
ATCACTTTAA AGTATTTCCA AGCTAAACAA GTTATCGAGC AAATCCAACG AGTTTCTCGT
CCAGGTCTTC GTGTATACAA GAAGAACGAC GCGTTACCAT CTGTTATGGG TGGTCTTGGT
ATTGCTGTTA TTTCTACATC AAAAGGCCTT ATGTCTGACC GCGCTGCGCG TAAAGCTGGT
CTTGGTGGCG AAATTATCTG CTACGTAGCT TAA
|
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| Protein sequence | MSMQDPISDM LTRVRNGQSA NKVAVKMPSS KLKVAIAALL KAEGYIADFA VEGDIKPELE
ITLKYFQAKQ VIEQIQRVSR PGLRVYKKND ALPSVMGGLG IAVISTSKGL MSDRAARKAG
LGGEIICYVA
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