| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0326 |
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| Symbol | rpsC |
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| ID | 6989165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 366930 |
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| End bp | 367628 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643378703 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_002261858 |
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| Protein GI | 209693930 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0364603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTCAAA AAGTACATCC TAATGGTATT CGTCTTGGCA TCGTTAAGCC TTGGAATGCT
ACATGGTTTG CTAGTAGCCA AGAGTTCGCT GACAACCTAG ACGGCGACTT CAAGGTACGT
CAGTATCTTA CTAAAGAACT GAAAAAAGCA TCTCTATCTC GCATCGTTAT CGAGCGTCCT
GCGAAGAGCA TCCGTGTGAC TATTCACACT GCTCGTCCAG GCGTAGTAAT CGGTAAGAAA
GGCGAAGACG TAGAAAAACT ACGCGCAGGC GTAGCTAAAA TCGCAGGTGT TCCAGCGCAA
ATCAACATTG CAGAAGTTCG CAAGCCTGAG CTAGATGCTC ACCTTGTAGC TGACAGCATT
GCTTCTCAAC TAGAACGTCG TGTTATGTTC CGTCGCGCTA TGAAGCGTGC GGTACAAAAT
GCAATGCGTC TAGGCGCTCA AGGCATCAAA GTACAAGTAG GCGGCCGTTT AGGCGGTGCT
GAAATCGCAC GTTCTGAGTG GTATCGTGAA GGTCGTGTAC CTCTACATAC TCTACGTGCT
GACATTGATT ACGCAACTGC TTCAGCTCAT ACGCAATATG GTGTGATTGG CGTTAAAGTT
TGGATCTTCA AAGGTGAAGT TCTAGGCGGT ATGCCAGCTG CTAATGCAGT AGAGCCTAAG
GCTGACAAGC CTAAGAAGCA GCGTAGAAGC CGTAAGTAA
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| Protein sequence | MGQKVHPNGI RLGIVKPWNA TWFASSQEFA DNLDGDFKVR QYLTKELKKA SLSRIVIERP
AKSIRVTIHT ARPGVVIGKK GEDVEKLRAG VAKIAGVPAQ INIAEVRKPE LDAHLVADSI
ASQLERRVMF RRAMKRAVQN AMRLGAQGIK VQVGGRLGGA EIARSEWYRE GRVPLHTLRA
DIDYATASAH TQYGVIGVKV WIFKGEVLGG MPAANAVEPK ADKPKKQRRS RK
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