Gene VSAL_I0229 details

Gene Information

• Locus tag: VSAL_I0229
• ID: 6988440
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 276622
• End bp: 277239
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643378614
• Product: cytochrome c
• Protein accession: YP_002261769
• Protein GI: 209693841
• COG category: [C] Energy production and conversion
• COG ID: [COG2863] Cytochrome c553

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.779368
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAT TAGCGCTGAT ATTAACTCTC CTAGCTAGTT GCTCAACATG GGCTCAAGGA 
GACATCGAAG CTGGGAAGCA AAAATCTGTA ACTTGTACGG CTTGTCATGG TCAAGAGGGC 
AACAGTACTC TGACTCAATA CCCGAACTTA GCTGGTCAAC ACGCAGGTTA TCTTGAAAAG 
CAGATCAATG AATTTAAATT AGGGATGCAA ACCCAAGGAA AACAAGGCCG TATGGACCCT 
GTTATGGGAG CAATGGCGAT GGCGGTTAGT GAAGAAGATG CAAAAGACAT TGCAGCGTAT 
TACGCCTCTT TACCAATGGC TGATAACACA ACGCCTGAAG ACTCGATTCC TGCCGGTAAA 
GCATTATATT TAGCGGGTGA TATGGAACGT GGTATTACGG CTTGTGTTGC TTGTCATGGA 
CCGCGTGGTA ACGGAACCTC ACTGTCAGGT TTTCCTAAGA TATCAGGACA ACATTCTGAC 
TACGTGAAAG CGCAGTTAGA GAAGTTTCGC TCTGCTGATC GTGCAAACGA TATGAATGGT 
ATGATGCGTG ATATCGCCAA AAAGCTTACT GACGACGACA TTGCGACACT TTCGCAATAT 
GTTGGTGGCT TGCATTAA 

 

Protein sequence

MKKLALILTL LASCSTWAQG DIEAGKQKSV TCTACHGQEG NSTLTQYPNL AGQHAGYLEK 
QINEFKLGMQ TQGKQGRMDP VMGAMAMAVS EEDAKDIAAY YASLPMADNT TPEDSIPAGK 
ALYLAGDMER GITACVACHG PRGNGTSLSG FPKISGQHSD YVKAQLEKFR SADRANDMNG 
MMRDIAKKLT DDDIATLSQY VGGLH