| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0222 |
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| Symbol | uvrD |
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| ID | 6988364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 264252 |
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| End bp | 266456 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378604 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_002261762 |
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| Protein GI | 209693834 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.211627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTT CTTTTCTTCT TGATGGTCTT AATGACAAAC AGCGCGAAGC CGTAGCCGCT
CCGTTAGAAA ACATGCTTGT ACTTGCGGGT GCCGGTAGTG GTAAAACTCG AGTACTTGTT
CATCGTATCG CATGGTTAAT GCAAATCGAG CAAGCGTCGC CCTTCTCAAT TATGTCGGTG
ACATTTACCA ATAAAGCCGC CGCTGAAATG CGTGGTCGTA TTGAAGAATT AATGCATGGC
AGCGCAGGGG GAATGTGGAA CGGTACTTTT CATGGTATTT GTCACCGTAT TCTTCGTGCT
CATTATCTTG ATGCGAAACT GCCTGAAGGT TTTCAGATCA TCGACTCTGA TGATCAACAA
CGCTTATTAA AGCGTTTGAT TAAAGCGCAG AACTTGGATG ATAAAAACTG GCCTGCACGT
CAAGCTGCAT GGTTCATCAA TGGGAAAAAA GATGAAGGTT TACGCCCGCA TCAAATTAAC
TCATTTAATG ATCCTATCGC TGAAACATGG TTAAAAGTGT ATCGCGCTTA TCAAGAAGCT
TGTGATCGTT CAGGCTTGGT CGATTTTGCT GAAATTCTTC TTCGTGCTCA TGAACTATTG
CGTGATCATC AGTATATCTG CGAACACTAC CAAGCTCGCT TTAAGCACAT TCTTGTCGAC
GAATTCCAAG ATACGAACAA CATTCAATAT GCATGGCTAC GTATGATGGC AGGCTCGGAT
TGTAAGGTCA TGATCGTTGG GGATGATGAT CAATCAATCT ATGGTTGGCG TGGTGCTCAA
ATTGAAAATA TTCAACGATT CTTAAATGAA TTTGTTGGTG CTAAAACCAT CCTTTTAGAG
CAAAACTACC GTTCAACAGC CAATATATTG AATGCTGCCA ATGAATTGAT CAGTAACAAT
ACCGAGCGAA TGGGCAAAGA GCTGTGGACT GAAGACGCTG ATGGCGAGTT GATTTCAATC
TATTCAGCTT ACAATGAAAT GGACGAAGCT CGTTTTGCGG TTGGAAAAAT TAAAGAATGG
CGCGATAACG GGGGAGCATT AGAAGATACC GCTTTCTTAT ATCGTAATAA TGCTCAATCT
CGAGTTCTTG AAGAAGCCTT AATACAAGCA GGTTTACCTT ATCGTATTTA TGGTGGGATG
CGATTCTTTG AACGTCAAGA AATCAAAGAT GCACTGTCCT ACTTACGTTT AATGAATAAT
CGTAATGATG ATGCTGCGTT TGAACGTGTC GTAAATACGC CAACACGAGG CCTAGGTGAC
AAAACTCTGG AAACTGTGCG TTTGGCAGCG CGTGAACGTG GTGCAACCAT GTGGCAAGCA
AGTATTGCCT TAATCGAAGA ACAAGTATTA CCTGGGCGTG CGGCGGGAGC GTTAGGTCGT
TTCGTTGAGC TAATTAATGC GCTAGAAGAT GATACACGTG ATTGCCGTCT GCATGAACAA
ACTGACCAAG TGATTAAAAG CTCGGGTTTG TTTACTATGT ACGAACAAGA AAAAGGCGAA
AAATCGAAAG CGCGTATTGA AAACTTGGAA GAATTAGTGA CCGCAACGCG TCAATTTGAT
AAACCTGAAG AAGCAGAAGA AATGACGGAT TTAACCGCAT TCTTGACGCA TGCCGCATTA
GAAGCGGGTG ATGGTCAGGC GGATGAATTT GAAGATGCGG TGCAATTAAT GACGTTGCAC
AGTGCAAAAG GGTTAGAGTT TCCTTTGGTC TTTATGGTGG GTGTTGAAGA GGGTATGTTC
CCAAGTCAAA TGTCAGCAGA AGAAGCAGGG CGTTTAGAAG AAGAACGTCG TCTTTGTTAT
GTTGGTATGA CTCGTGCGAT GGAGAAGCTC TATATTCTTT ACGCAGAAAC TCGTCGAGTG
TATGGGCAAG AGAAATTTCA TAAGCCATCA CGCTTTATTA AAGAAATCTC GGCAAAGTTT
GTTGAAGAAG TTCGCATGAA AGCAAAAGTC AGCCGAACCA GTTTATATGG TAGCTATGGC
TCTCAAAGTG AGTCATCCCA AGAGCGTTTT GGTCAAACGG CAATGAGTAA TAGCTTTAAT
GAAACGGGCT ACAATTTAGG GCAGCGAGTG AAGCATCCTA AATTTGGTGA AGGAACGATC
ATCAATTTTG AAGGTGCTGG CCCACAAGGG CGTGTTCAGG TTGCTTTTAA TGGTGAAGGG
ATCAAATGGC TTGTAACGCA ATACGCGAAA TTAGAGTCGG TGTAA
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| Protein sequence | MDVSFLLDGL NDKQREAVAA PLENMLVLAG AGSGKTRVLV HRIAWLMQIE QASPFSIMSV
TFTNKAAAEM RGRIEELMHG SAGGMWNGTF HGICHRILRA HYLDAKLPEG FQIIDSDDQQ
RLLKRLIKAQ NLDDKNWPAR QAAWFINGKK DEGLRPHQIN SFNDPIAETW LKVYRAYQEA
CDRSGLVDFA EILLRAHELL RDHQYICEHY QARFKHILVD EFQDTNNIQY AWLRMMAGSD
CKVMIVGDDD QSIYGWRGAQ IENIQRFLNE FVGAKTILLE QNYRSTANIL NAANELISNN
TERMGKELWT EDADGELISI YSAYNEMDEA RFAVGKIKEW RDNGGALEDT AFLYRNNAQS
RVLEEALIQA GLPYRIYGGM RFFERQEIKD ALSYLRLMNN RNDDAAFERV VNTPTRGLGD
KTLETVRLAA RERGATMWQA SIALIEEQVL PGRAAGALGR FVELINALED DTRDCRLHEQ
TDQVIKSSGL FTMYEQEKGE KSKARIENLE ELVTATRQFD KPEEAEEMTD LTAFLTHAAL
EAGDGQADEF EDAVQLMTLH SAKGLEFPLV FMVGVEEGMF PSQMSAEEAG RLEEERRLCY
VGMTRAMEKL YILYAETRRV YGQEKFHKPS RFIKEISAKF VEEVRMKAKV SRTSLYGSYG
SQSESSQERF GQTAMSNSFN ETGYNLGQRV KHPKFGEGTI INFEGAGPQG RVQVAFNGEG
IKWLVTQYAK LESV
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