| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0204 |
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| Symbol | ompR |
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| ID | 6988443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 245950 |
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| End bp | 246669 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643378587 |
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| Product | osmolarity response regulator |
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| Protein accession | YP_002261745 |
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| Protein GI | 209693817 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGAAA ACCATAAGAT TTTAGTTGTT GATGATGATG CGCGTCTTCG TTCTTTATTA
GAGCGTTATT TGTCAGAGCA AGGCTTTCAA GTTCGTAGTG TCGCAAACAG TGAGCAAATG
GATCGCTTGT TAGCTCGTGA AACGTTTCAC TTAATGGTAT TGGACTTAAT GCTTCCTGGT
GAAGATGGGT TATCTATCTG TCGTCGTCTG CGCAGTAACA ATAATATGCT ACCTATTTTA
ATGCTAACGG CAAAAGGTGA TGAGATTGAT CGCATTGTTG GCTTAGAAGT GGGCGCGGAC
GATTATCTAC CAAAGCCATT TAACCCACGT GAATTACTGG CGCGTATTCG AGCGGTTCTA
CGTCGTCAAG TGATTGAAGC GCCGGGTGCG CCAAGTGCGG AAGATAAAAT GGTTGAGTTT
GGTGAGTTTC GCCTAAACTT AGGTACGCGT GAAATGTTCC GTAATGAAGA GCCAATGCCA
CTAACATCGG GCGAATTTGC GGTACTTAAA TCATTGGTGA CGAATATGCG TGAACCAATG
TCGCGTGACA AGTTGATGAA TATGGCGCGC GGTCGTGAGT ATTCAGCAAT GGAGCGCTCG
ATTGATGTTC AAATTTCTCG CCTTCGTCGT ATGATTGAAG TTGATTCAAG CCGCCCTCGT
TATATTCAAA CGGTATGGGG ATTAGGTTAT GTGTTTGTAC CGGATGGTGC AGAGGGATAG
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| Protein sequence | MQENHKILVV DDDARLRSLL ERYLSEQGFQ VRSVANSEQM DRLLARETFH LMVLDLMLPG
EDGLSICRRL RSNNNMLPIL MLTAKGDEID RIVGLEVGAD DYLPKPFNPR ELLARIRAVL
RRQVIEAPGA PSAEDKMVEF GEFRLNLGTR EMFRNEEPMP LTSGEFAVLK SLVTNMREPM
SRDKLMNMAR GREYSAMERS IDVQISRLRR MIEVDSSRPR YIQTVWGLGY VFVPDGAEG
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