Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0184 |
Symbol | waaE |
ID | 6986365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 225230 |
End bp | 226012 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643378569 |
Product | glycosyl transferase |
Protein accession | YP_002261727 |
Protein GI | 209693799 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.397998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAT CCTCTCCAAC CTTAGCGGTT GCGCTTATTG TTAAAAATGA AGCAAAACAT TTAAAAGCCT GTCTTGATAC CGTTGCTGAT TGGGTTGATG AAATTGTGAT AATGGATTCA GGAAGTACTG ATTCAACTGA AACAATTGCT CGTGAATTTA CTGATAAATT TATTGTAAAT AAAGAGTGGC CAGGGTTTGG CAAACAACGT CAATTAGCAC AACAGCACGT TACCTCAGAT TATGTATTAT GGCTTGATGC CGATGAGAGA GTCACTCCAG AGTTAAAAAC TGAAATTTTA GCTGCCGTGA AAGCAAACAA GACAAAGACC GCATATAAAA TAAATCGCTC AAGCTCTGCG TTTGGGAAAT TTATTAAGCA CTCTGGTTGG TCTCCTGATT GGGTTGTTCG TTTATATAAA ACTGATGAAA CTCAATATAG CGACTCTCTA GTGCATGAAA GTGTCGTTAT TCCAAACCAT ATTCAAGTTA ACGCTTTAAC TGGTCGCTTA TTACATTTCA CATACGATGC TTTGCAGCAA TATAATGCAA AAAATGTCAT GTATATAAAA TCTTGGGTCG ACCAACGCGA AGGAAAAAAG AAAGGCTCAC TCAGTGGTGC TTTTCTTCAT GGATTCTTTT GTTTTATCCG TATGTATATT TTAAAGCGTG GTTTTTTAGA TGGCCGCCAC GGATTACTAC TTGCAACACT AAGCGCTAGC GTGACGTTCA ATCGTTACGC TGATCTATGG CTACGAGACT ACAATAAAGC AAACAAGGAA TAA
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Protein sequence | MTTSSPTLAV ALIVKNEAKH LKACLDTVAD WVDEIVIMDS GSTDSTETIA REFTDKFIVN KEWPGFGKQR QLAQQHVTSD YVLWLDADER VTPELKTEIL AAVKANKTKT AYKINRSSSA FGKFIKHSGW SPDWVVRLYK TDETQYSDSL VHESVVIPNH IQVNALTGRL LHFTYDALQQ YNAKNVMYIK SWVDQREGKK KGSLSGAFLH GFFCFIRMYI LKRGFLDGRH GLLLATLSAS VTFNRYADLW LRDYNKANKE
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