Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0179 |
Symbol | rmlA |
ID | 6989124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 219197 |
End bp | 220081 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643378564 |
Product | glucose-1-phosphate thymidylyltransferase RmlA |
Protein accession | YP_002261722 |
Protein GI | 209693794 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGGA TTGTTTTAGC CGGAGGCTCA GGCACACGCC TATATCCATT AACTCGTGGA GTATCAAAGC AGTTATTACC TATTTACGAC AAACCAATGG TGTTTTATCC GATATCGACA TTAATGCTCG CCGGTATTAA AGATATTTTA ATTATCACTA CTCCAGAAGA TAACGCAGGT TTTAAACGCT TATTAGGCGA TGGCTCTGAT TTTGGGATTA ACCTTGAATA CGCAATTCAA CCAAGCCCTG ATGGTTTAGC TCAAGCTTTT ATTATTGGCG AAGAGTTCAT TGGTGATGAC CCAGTCTGCT TAGTACTTGG TGATAATATT TTCTATGGTC AATCTTTCTC TAAAACGTTA AAGAATGCGG CTTCACGTGA CTTAGGTGCC ACCGTATTTG GTTATCAAGT AAAAGACCCA GAGCGTTTTG GTGTGGTTGA GTTTGATGAA AAAATGAAAG CAATCTCAAT TGAAGAAAAG CCACTAAAAC CTAAATCGAA TTATGCGGTG ACAGGATTAT ACTTTTACGA TAACCGCGTA GTTGAAATGG CAAAACAAGT TAAGCCTTCT CATCGTGGTG AGCTTGAAAT TACCACGCTT AATGAAATGT ATCTTAACGA TGGTTCTCTT AATGTTGAAT TATTAGCTCG TGGCTTTGCG TGGCTAGATA CAGGGACTCA TGAGAGTCTG CATGAAGCCT CTTCATTTGT GCAAACCATT GAGCATATAC AAGGCTTAAA AGTGGCGTGT TTAGAAGAAA TATCATGGCG TAATGGTTGG TTATCAGATG AGCAAATATT AGATCTCGCA ACCCCGATGA TGAAGAATGA GTATGGCCAA TATTTAACCC GATTAATTAA CGATAATAAA CAGAAAGAAT TATAA
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Protein sequence | MKGIVLAGGS GTRLYPLTRG VSKQLLPIYD KPMVFYPIST LMLAGIKDIL IITTPEDNAG FKRLLGDGSD FGINLEYAIQ PSPDGLAQAF IIGEEFIGDD PVCLVLGDNI FYGQSFSKTL KNAASRDLGA TVFGYQVKDP ERFGVVEFDE KMKAISIEEK PLKPKSNYAV TGLYFYDNRV VEMAKQVKPS HRGELEITTL NEMYLNDGSL NVELLARGFA WLDTGTHESL HEASSFVQTI EHIQGLKVAC LEEISWRNGW LSDEQILDLA TPMMKNEYGQ YLTRLINDNK QKEL
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